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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
NQVDIIKASDFQSLEDVVSAKYSDIKMDTDIQVSQIMEMVSNPESLNPESLAKLQTTLSN
YSIGVSLAGTLARKTVSAVETLLKS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8axk-a1-m1-cR 85 85 1.0000 1.0000 1.0000 2.14e-56 8axk-a1-m1-cM_8axk-a1-m1-cR
2 8axk-a1-m1-cM 42 42 0.4941 1.0000 1.0000 7.70e-23 8axk-a1-m1-cM_8axk-a1-m1-cR
3 7ahi-a1-m1-c1K 90 78 0.3294 0.3111 0.3590 3.22e-07 7ahi-a1-m1-c1K_7ahi-a1-m1-c1L
4 6q16-a1-m1-cAR 88 78 0.3294 0.3182 0.3590 3.23e-07 6q16-a1-m1-cAM_6q16-a1-m1-cAR
5 7ahi-a1-m1-c1L 94 78 0.3294 0.2979 0.3590 3.93e-07 7ahi-a1-m1-c1K_7ahi-a1-m1-c1L
6 6q16-a1-m1-cAM 39 39 0.2353 0.5128 0.5128 5.18e-06 6q16-a1-m1-cAM_6q16-a1-m1-cAR
7 3blx-a6-m1-cP 326 91 0.2353 0.0613 0.2198 5.2 3blx-a6-m1-cP_3blx-a6-m1-cN
8 3blx-a6-m1-cN 345 91 0.2353 0.0580 0.2198 5.3 3blx-a6-m1-cP_3blx-a6-m1-cN
9 7xsi-a2-m1-cD 130 69 0.1765 0.1154 0.2174 6.6 7xsi-a2-m1-cC_7xsi-a2-m1-cD
10 7xsi-a2-m1-cC 130 69 0.1765 0.1154 0.2174 7.6 7xsi-a2-m1-cC_7xsi-a2-m1-cD
11 1vl4-a1-m1-cB 428 29 0.1176 0.0234 0.3448 9.7 1vl4-a1-m1-cA_1vl4-a1-m1-cB
12 1vl4-a1-m1-cA 428 29 0.1176 0.0234 0.3448 9.7 1vl4-a1-m1-cA_1vl4-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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