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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
NRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCEAAETMYDKILKNLSRSRVGQACCR
PVAFDDDLSFLDDSLVYHILRKHSAKRCGCI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1agq-a1-m1-cA 91 91 1.0000 1.0000 1.0000 6.21e-64 1agq-a1-m1-cA_1agq-a1-m1-cB
2 1agq-a1-m1-cB 96 95 1.0000 0.9479 0.9579 7.38e-62 1agq-a1-m1-cA_1agq-a1-m1-cB
3 3fub-a1-m2-cB 92 92 0.9231 0.9130 0.9130 1.21e-47 3fub-a1-m1-cB_3fub-a1-m2-cB
4 3fub-a1-m1-cB 92 92 0.9231 0.9130 0.9130 1.21e-47 3fub-a1-m1-cB_3fub-a1-m2-cB
5 6q2n-a1-m1-cB 86 88 0.8901 0.9419 0.9205 1.02e-45 6q2n-a1-m1-cA_6q2n-a1-m1-cB
6 6q2n-a1-m1-cA 86 88 0.8901 0.9419 0.9205 1.02e-45 6q2n-a1-m1-cA_6q2n-a1-m1-cB
7 7ab8-a1-m2-cB 98 96 0.7033 0.6531 0.6667 3.88e-43 7ab8-a1-m1-cB_7ab8-a1-m2-cB
8 7ab8-a1-m1-cB 98 96 0.7033 0.6531 0.6667 3.88e-43 7ab8-a1-m1-cB_7ab8-a1-m2-cB
9 5nmz-a1-m1-cB 99 97 0.4176 0.3838 0.3918 2.36e-21 5nmz-a1-m1-cB_5nmz-a1-m1-cA
10 5nmz-a1-m1-cA 101 97 0.4176 0.3762 0.3918 2.63e-21 5nmz-a1-m1-cB_5nmz-a1-m1-cA
11 2ask-a3-m3-cB 101 101 0.4066 0.3663 0.3663 1.01e-13 2ask-a3-m3-cA_2ask-a3-m3-cB
12 2ask-a3-m3-cA 101 101 0.4066 0.3663 0.3663 1.01e-13 2ask-a3-m3-cA_2ask-a3-m3-cB
13 2ask-a2-m2-cB 101 101 0.4066 0.3663 0.3663 1.01e-13 2ask-a2-m1-cA_2ask-a2-m2-cB
14 2ask-a2-m1-cA 101 101 0.4066 0.3663 0.3663 1.01e-13 2ask-a2-m1-cA_2ask-a2-m2-cB
15 1uby-a2-m3-cA 348 95 0.3297 0.0862 0.3158 0.24 1uby-a2-m1-cA_1uby-a2-m3-cA
16 1uby-a2-m1-cA 348 95 0.3297 0.0862 0.3158 0.24 1uby-a2-m1-cA_1uby-a2-m3-cA
17 1uby-a1-m2-cA 348 95 0.3297 0.0862 0.3158 0.24 1uby-a1-m1-cA_1uby-a1-m2-cA
18 1uby-a1-m1-cA 348 95 0.3297 0.0862 0.3158 0.24 1uby-a1-m1-cA_1uby-a1-m2-cA
19 3eya-a3-m1-cJ 522 31 0.1429 0.0249 0.4194 1.1 3eya-a3-m1-cJ_3eya-a3-m1-cL
20 3eya-a3-m1-cL 523 31 0.1429 0.0249 0.4194 1.1 3eya-a3-m1-cI_3eya-a3-m1-cL, 3eya-a3-m1-cJ_3eya-a3-m1-cL, 3eya-a3-m1-cK_3eya-a3-m1-cL
21 3eya-a3-m1-cK 523 31 0.1429 0.0249 0.4194 1.1 3eya-a3-m1-cK_3eya-a3-m1-cL
22 3eya-a3-m1-cI 523 31 0.1429 0.0249 0.4194 1.1 3eya-a3-m1-cI_3eya-a3-m1-cL
23 3cc1-a1-m2-cB 400 26 0.1319 0.0300 0.4615 2.5 3cc1-a1-m2-cB_3cc1-a1-m1-cA, 3cc1-a1-m2-cB_3cc1-a1-m2-cA
24 3cc1-a1-m2-cA 415 26 0.1319 0.0289 0.4615 2.5 3cc1-a1-m1-cA_3cc1-a1-m2-cA, 3cc1-a1-m2-cB_3cc1-a1-m2-cA
25 3cc1-a1-m1-cA 415 26 0.1319 0.0289 0.4615 2.5 3cc1-a1-m1-cA_3cc1-a1-m2-cA, 3cc1-a1-m2-cB_3cc1-a1-m1-cA
26 1i85-a1-m1-cD 111 41 0.1429 0.1171 0.3171 4.0 1i85-a1-m1-cD_1i85-a1-m1-cC
27 6gyr-a2-m1-cB 583 45 0.1429 0.0223 0.2889 4.2 6gyr-a2-m1-cB_6gyr-a2-m1-cD
28 6gyr-a2-m1-cD 584 45 0.1429 0.0223 0.2889 4.2 6gyr-a2-m1-cB_6gyr-a2-m1-cD
29 7dv4-a2-m1-cC 113 41 0.1429 0.1150 0.3171 4.5 7dv4-a2-m1-cC_7dv4-a2-m1-cE
30 5jhw-a1-m1-cB 109 67 0.1648 0.1376 0.2239 9.1 5jhw-a1-m1-cA_5jhw-a1-m1-cB
31 5jhw-a1-m1-cA 109 67 0.1648 0.1376 0.2239 9.1 5jhw-a1-m1-cA_5jhw-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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