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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=31)
NRPRFTLQELRDVLQERNKLKSQLLVVQEEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6sq2-a1-m1-cD 31 31 1.0000 1.0000 1.0000 5.97e-15 6sq2-a1-m1-cD_6sq2-a1-m1-cE
2 6sq2-a1-m1-cE 32 31 1.0000 0.9688 1.0000 6.05e-15 6sq2-a1-m1-cD_6sq2-a1-m1-cE
3 1yhn-a1-m2-cB 65 24 0.3548 0.1692 0.4583 0.19 1yhn-a1-m1-cB_1yhn-a1-m2-cB
4 1yhn-a1-m1-cB 65 24 0.3548 0.1692 0.4583 0.19 1yhn-a1-m1-cB_1yhn-a1-m2-cB
5 8e0q-a1-m1-cB 1689 28 0.3871 0.0071 0.4286 1.2 8e0q-a1-m1-cA_8e0q-a1-m1-cB
6 8e0q-a1-m1-cA 1689 28 0.3871 0.0071 0.4286 1.2 8e0q-a1-m1-cA_8e0q-a1-m1-cB
7 8ewi-a1-m1-cD 1775 28 0.3871 0.0068 0.4286 1.3 8ewi-a1-m1-cB_8ewi-a1-m1-cD
8 8ewi-a1-m1-cB 1775 28 0.3871 0.0068 0.4286 1.3 8ewi-a1-m1-cB_8ewi-a1-m1-cD
9 6s9a-a1-m1-cA 312 24 0.3871 0.0385 0.5000 5.1 6s9a-a1-m1-cA_6s9a-a1-m1-cB
10 6s9a-a1-m1-cB 320 24 0.3871 0.0375 0.5000 5.2 6s9a-a1-m1-cA_6s9a-a1-m1-cB
11 3snh-a1-m2-cA 652 24 0.3871 0.0184 0.5000 7.5 3snh-a1-m1-cA_3snh-a1-m2-cA
12 3snh-a1-m1-cA 652 24 0.3871 0.0184 0.5000 7.5 3snh-a1-m1-cA_3snh-a1-m2-cA
13 7el6-a1-m1-cA 348 24 0.2903 0.0259 0.3750 9.1 7el6-a1-m1-cB_7el6-a1-m1-cA
14 7el6-a1-m1-cB 338 24 0.2903 0.0266 0.3750 9.5 7el6-a1-m1-cB_7el6-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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