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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=69)
NRQFLSLTGVSKVQSFDPKEILLETIQGVLSIKGEKLGIKHLDLKAGQVEVEGLIDALVY
PLEHHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ipf-a1-m1-cA 69 69 1.0000 1.0000 1.0000 2.60e-44 3ipf-a1-m1-cB_3ipf-a1-m1-cA
2 3ipf-a1-m1-cB 65 65 0.9420 1.0000 1.0000 4.13e-41 3ipf-a1-m1-cB_3ipf-a1-m1-cA
3 2ks0-a1-m1-cB 66 69 0.9275 0.9697 0.9275 2.99e-38 2ks0-a1-m1-cA_2ks0-a1-m1-cB
4 2ks0-a1-m1-cA 66 69 0.9275 0.9697 0.9275 2.99e-38 2ks0-a1-m1-cA_2ks0-a1-m1-cB
5 3hsl-a1-m2-cX 287 54 0.2754 0.0662 0.3519 0.64 3hsl-a1-m1-cX_3hsl-a1-m2-cX
6 3hsl-a1-m1-cX 287 54 0.2754 0.0662 0.3519 0.64 3hsl-a1-m1-cX_3hsl-a1-m2-cX
7 8c9t-a2-m1-cC 228 66 0.3188 0.0965 0.3333 1.3 8c9t-a2-m1-cB_8c9t-a2-m1-cC
8 5j7n-a3-m3-cA 109 20 0.1449 0.0917 0.5000 2.0 5j7n-a3-m1-cA_5j7n-a3-m3-cA
9 5j7n-a3-m1-cA 109 20 0.1449 0.0917 0.5000 2.0 5j7n-a3-m1-cA_5j7n-a3-m3-cA
10 5j7n-a2-m2-cA 109 20 0.1449 0.0917 0.5000 2.0 5j7n-a2-m1-cA_5j7n-a2-m2-cA
11 5j7n-a2-m1-cA 109 20 0.1449 0.0917 0.5000 2.0 5j7n-a2-m1-cA_5j7n-a2-m2-cA
12 3e2t-a2-m2-cA 307 29 0.2029 0.0456 0.4828 2.5 3e2t-a2-m1-cA_3e2t-a2-m2-cA
13 3e2t-a2-m1-cA 307 29 0.2029 0.0456 0.4828 2.5 3e2t-a2-m1-cA_3e2t-a2-m2-cA
14 2o03-a1-m2-cA 129 81 0.3333 0.1783 0.2840 2.7 2o03-a1-m1-cA_2o03-a1-m2-cA
15 2o03-a1-m1-cA 129 81 0.3333 0.1783 0.2840 2.7 2o03-a1-m1-cA_2o03-a1-m2-cA
16 4z6k-a1-m1-cC 345 25 0.1594 0.0319 0.4400 3.0 4z6k-a1-m1-cD_4z6k-a1-m1-cC
17 4z6k-a1-m1-cA 345 25 0.1594 0.0319 0.4400 3.0 4z6k-a1-m1-cD_4z6k-a1-m1-cA
18 3gla-a1-m1-cA 97 20 0.1304 0.0928 0.4500 3.5 3gla-a1-m1-cA_3gla-a1-m1-cB
19 3gla-a1-m1-cB 99 20 0.1304 0.0909 0.4500 3.6 3gla-a1-m1-cA_3gla-a1-m1-cB
20 4pic-a1-m1-cB 150 29 0.2029 0.0933 0.4828 6.0 4pic-a1-m1-cA_4pic-a1-m1-cB
21 4pic-a1-m1-cA 150 29 0.2029 0.0933 0.4828 6.0 4pic-a1-m1-cA_4pic-a1-m1-cB
22 1jof-a2-m1-cH 355 57 0.2754 0.0535 0.3333 6.4 1jof-a2-m1-cE_1jof-a2-m1-cH, 1jof-a2-m1-cG_1jof-a2-m1-cH
23 1jof-a2-m1-cG 355 57 0.2754 0.0535 0.3333 6.4 1jof-a2-m1-cG_1jof-a2-m1-cH
24 1jof-a2-m1-cE 355 57 0.2754 0.0535 0.3333 6.4 1jof-a2-m1-cE_1jof-a2-m1-cH
25 7m1t-a1-m1-cB 316 22 0.1884 0.0411 0.5909 7.3 7m1t-a1-m1-cB_7m1t-a1-m1-cA
26 5m48-a1-m2-cA 108 29 0.1884 0.1204 0.4483 8.4 5m48-a1-m1-cA_5m48-a1-m2-cA
27 5m48-a1-m1-cA 108 29 0.1884 0.1204 0.4483 8.4 5m48-a1-m1-cA_5m48-a1-m2-cA
28 3k17-a1-m1-cD 347 17 0.1449 0.0288 0.5882 9.7 3k17-a1-m1-cC_3k17-a1-m1-cD
29 3k17-a1-m1-cC 347 17 0.1449 0.0288 0.5882 9.7 3k17-a1-m1-cB_3k17-a1-m1-cC, 3k17-a1-m1-cC_3k17-a1-m1-cD
30 3k17-a1-m1-cB 347 17 0.1449 0.0288 0.5882 9.7 3k17-a1-m1-cB_3k17-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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