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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
NRVSTVQQLTKRFSLGMLQGRGPLKLFMALVAFLRFLTIPPTAGILKRWGTIKKSKAINV
LRGFRKEIGRMLNILNRRRR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6vg5-a1-m2-cB 81 80 1.0000 0.9877 1.0000 1.33e-51 6vg5-a1-m1-cB_6vg5-a1-m2-cB, 6vg5-a1-m2-cA_6vg5-a1-m2-cB
2 6vg5-a1-m2-cA 81 80 1.0000 0.9877 1.0000 1.33e-51 6vg5-a1-m2-cA_6vg5-a1-m2-cB
3 6vg5-a1-m1-cB 81 80 1.0000 0.9877 1.0000 1.33e-51 6vg5-a1-m1-cB_6vg5-a1-m2-cB
4 1r6r-a1-m1-cB 80 80 1.0000 1.0000 1.0000 1.57e-51 1r6r-a1-m1-cA_1r6r-a1-m1-cB
5 1r6r-a1-m1-cA 80 80 1.0000 1.0000 1.0000 1.57e-51 1r6r-a1-m1-cA_1r6r-a1-m1-cB
6 5ow2-a1-m1-cB 73 68 0.3125 0.3425 0.3676 1.03e-14 5ow2-a1-m1-cA_5ow2-a1-m1-cB
7 5ow2-a1-m1-cA 73 68 0.3125 0.3425 0.3676 1.03e-14 5ow2-a1-m1-cA_5ow2-a1-m1-cB
8 1sfk-a4-m6-cG 73 67 0.3500 0.3836 0.4179 1.14e-14 1sfk-a4-m3-cG_1sfk-a4-m6-cG, 1sfk-a4-m6-cH_1sfk-a4-m6-cG
9 1sfk-a4-m5-cE 73 67 0.3500 0.3836 0.4179 1.14e-14 1sfk-a4-m6-cH_1sfk-a4-m5-cE
10 1sfk-a4-m3-cG 73 67 0.3500 0.3836 0.4179 1.14e-14 1sfk-a4-m3-cG_1sfk-a4-m6-cG
11 1sfk-a3-m4-cC 73 67 0.3500 0.3836 0.4179 1.14e-14 1sfk-a3-m2-cA_1sfk-a3-m4-cC
12 1sfk-a3-m2-cA 73 67 0.3500 0.3836 0.4179 1.14e-14 1sfk-a3-m2-cA_1sfk-a3-m4-cC
13 1sfk-a1-m1-cD 73 67 0.3500 0.3836 0.4179 1.14e-14 1sfk-a1-m1-cA_1sfk-a1-m1-cD
14 1sfk-a1-m1-cA 73 67 0.3500 0.3836 0.4179 1.14e-14 1sfk-a1-m1-cA_1sfk-a1-m1-cD
15 1sfk-a4-m6-cH 58 58 0.3125 0.4310 0.4310 6.72e-13 1sfk-a4-m6-cH_1sfk-a4-m5-cE, 1sfk-a4-m6-cH_1sfk-a4-m6-cG
16 5yjc-a1-m1-cB 247 50 0.2125 0.0688 0.3400 6.2 5yjc-a1-m1-cA_5yjc-a1-m1-cB
17 5yjc-a1-m1-cA 247 50 0.2125 0.0688 0.3400 6.2 5yjc-a1-m1-cA_5yjc-a1-m1-cB
18 6dbb-a3-m3-cC 502 45 0.2125 0.0339 0.3778 8.6 6dbb-a3-m1-cC_6dbb-a3-m3-cC
19 6dbb-a3-m1-cC 502 45 0.2125 0.0339 0.3778 8.6 6dbb-a3-m1-cC_6dbb-a3-m3-cC

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Reference:
Jacob Schwartz et al.

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