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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=53)
NSALDFLKHHLGAATPENPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQYE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2yy0-a3-m3-cD 53 53 1.0000 1.0000 1.0000 1.25e-31 2yy0-a3-m2-cA_2yy0-a3-m3-cD, 2yy0-a3-m2-cD_2yy0-a3-m3-cD, 2yy0-a3-m3-cC_2yy0-a3-m3-cD
2 2yy0-a3-m2-cD 53 53 1.0000 1.0000 1.0000 1.25e-31 2yy0-a3-m2-cD_2yy0-a3-m3-cD
3 2yy0-a3-m3-cA 38 38 0.7170 1.0000 1.0000 4.14e-19 2yy0-a3-m3-cC_2yy0-a3-m3-cA
4 2yy0-a3-m2-cA 38 38 0.7170 1.0000 1.0000 4.14e-19 2yy0-a3-m2-cA_2yy0-a3-m3-cD
5 2yy0-a3-m3-cC 37 37 0.6981 1.0000 1.0000 5.94e-18 2yy0-a3-m3-cC_2yy0-a3-m3-cA, 2yy0-a3-m3-cC_2yy0-a3-m3-cD
6 2zxi-a2-m1-cD 603 53 0.3396 0.0299 0.3396 0.010 2zxi-a2-m1-cD_2zxi-a2-m1-cC
7 2zxh-a1-m1-cB 601 53 0.3396 0.0300 0.3396 0.010 2zxh-a1-m1-cB_2zxh-a1-m1-cA
8 2zxi-a2-m1-cC 604 53 0.3396 0.0298 0.3396 0.010 2zxi-a2-m1-cD_2zxi-a2-m1-cC
9 2zxh-a1-m1-cA 603 53 0.3396 0.0299 0.3396 0.11 2zxh-a1-m1-cB_2zxh-a1-m1-cA
10 1dip-a1-m1-cB 77 44 0.3019 0.2078 0.3636 1.7 1dip-a1-m1-cA_1dip-a1-m1-cB
11 1dip-a1-m1-cA 77 44 0.3019 0.2078 0.3636 1.7 1dip-a1-m1-cA_1dip-a1-m1-cB
12 7sqc-a1-m1-c0L 54 15 0.1509 0.1481 0.5333 2.0 7sqc-a1-m1-c0L_7sqc-a1-m1-c0K
13 2ivo-a1-m2-cB 325 35 0.2453 0.0400 0.3714 2.2 2ivo-a1-m2-cA_2ivo-a1-m2-cB
14 2ivo-a1-m2-cA 325 35 0.2453 0.0400 0.3714 2.2 2ivo-a1-m1-cA_2ivo-a1-m2-cA, 2ivo-a1-m2-cA_2ivo-a1-m2-cB
15 2ivo-a1-m1-cA 325 35 0.2453 0.0400 0.3714 2.2 2ivo-a1-m1-cA_2ivo-a1-m2-cA
16 7som-a1-m1-cV 67 15 0.1509 0.1194 0.5333 2.3 7som-a1-m1-cW_7som-a1-m1-cV
17 7som-a1-m1-cW 63 16 0.1509 0.1270 0.5000 2.3 7som-a1-m1-cW_7som-a1-m1-cV
18 7xsg-a1-m2-cB 545 47 0.2453 0.0239 0.2766 2.4 7xsg-a1-m1-cA_7xsg-a1-m2-cB
19 7xsg-a1-m1-cA 545 47 0.2453 0.0239 0.2766 2.4 7xsg-a1-m1-cA_7xsg-a1-m2-cB
20 7sqc-a1-m1-c0K 63 15 0.1509 0.1270 0.5333 2.5 7sqc-a1-m1-c0L_7sqc-a1-m1-c0K
21 6fue-a2-m1-cF 37 20 0.1887 0.2703 0.5000 6.0 6fue-a2-m1-cE_6fue-a2-m1-cF
22 4o7h-a1-m1-cA 222 24 0.1887 0.0450 0.4167 6.5 4o7h-a1-m1-cB_4o7h-a1-m1-cA
23 5to6-a1-m1-cD 140 39 0.2642 0.1000 0.3590 7.0 5to6-a1-m1-cB_5to6-a1-m1-cD
24 5to6-a1-m1-cC 140 39 0.2642 0.1000 0.3590 7.0 5to6-a1-m1-cC_5to6-a1-m1-cA
25 5to6-a1-m1-cA 141 39 0.2642 0.0993 0.3590 7.0 5to6-a1-m1-cC_5to6-a1-m1-cA
26 5to6-a1-m1-cB 139 39 0.2642 0.1007 0.3590 7.1 5to6-a1-m1-cB_5to6-a1-m1-cD
27 4o7h-a1-m1-cB 220 24 0.1887 0.0455 0.4167 7.2 4o7h-a1-m1-cB_4o7h-a1-m1-cA
28 5to7-a1-m1-cD 141 39 0.2642 0.0993 0.3590 7.6 5to7-a1-m1-cB_5to7-a1-m1-cD
29 5to7-a1-m1-cB 141 39 0.2642 0.0993 0.3590 7.6 5to7-a1-m1-cA_5to7-a1-m1-cB, 5to7-a1-m1-cB_5to7-a1-m1-cD
30 5to7-a1-m1-cA 141 39 0.2642 0.0993 0.3590 7.6 5to7-a1-m1-cA_5to7-a1-m1-cB
31 5to5-a1-m1-cA 141 39 0.2642 0.0993 0.3590 7.6 5to5-a1-m1-cB_5to5-a1-m1-cA
32 5to5-a1-m1-cB 140 39 0.2642 0.1000 0.3590 8.0 5to5-a1-m1-cB_5to5-a1-m1-cA
33 3he3-a6-m1-cJ 361 53 0.3019 0.0443 0.3019 8.4 3he3-a6-m1-cJ_3he3-a6-m1-cC
34 3hdq-a6-m1-cJ 361 53 0.3019 0.0443 0.3019 8.4 3hdq-a6-m1-cD_3hdq-a6-m1-cJ
35 2avw-a2-m1-cC 289 36 0.2264 0.0415 0.3333 8.9 2avw-a2-m1-cC_2avw-a2-m1-cD
36 2avw-a2-m1-cD 296 36 0.2264 0.0405 0.3333 9.3 2avw-a2-m1-cC_2avw-a2-m1-cD
37 3hdq-a6-m1-cD 360 53 0.3019 0.0444 0.3019 9.3 3hdq-a6-m1-cD_3hdq-a6-m1-cJ
38 3he3-a6-m1-cC 362 53 0.3019 0.0442 0.3019 9.3 3he3-a6-m1-cJ_3he3-a6-m1-cC
39 5huz-a1-m1-cB 44 20 0.2075 0.2500 0.5500 9.4 5huz-a1-m1-cA_5huz-a1-m1-cB
40 5huz-a1-m1-cA 44 20 0.2075 0.2500 0.5500 9.4 5huz-a1-m1-cA_5huz-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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