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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
NSEVIKDLYEYLCNVRVHKSYEDDSGLWFDISQGTYSIDYKLGFVKGEVIYAPVLKQRST
EELYSLQSKLPEYFETLSFPLSSLNQFYNKIAKSLN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3n4r-a1-m1-cB 96 96 1.0000 1.0000 1.0000 8.75e-67 3n4r-a1-m1-cA_3n4r-a1-m1-cB
2 5v3n-a1-m2-cA 109 108 0.9792 0.8624 0.8704 2.54e-59 5v3n-a1-m1-cA_5v3n-a1-m2-cA
3 5v3n-a1-m1-cA 109 108 0.9792 0.8624 0.8704 2.54e-59 5v3n-a1-m1-cA_5v3n-a1-m2-cA
4 3n4r-a1-m1-cA 91 96 0.9479 1.0000 0.9479 1.73e-58 3n4r-a1-m1-cA_3n4r-a1-m1-cB
5 6mje-a2-m1-cC 110 97 0.7083 0.6182 0.7010 4.81e-45 6mje-a2-m1-cE_6mje-a2-m1-cC
6 6mje-a2-m1-cE 109 97 0.7083 0.6239 0.7010 1.80e-43 6mje-a2-m1-cE_6mje-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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