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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
NSEVIKDLYEYLCNVRVHKSYSGLWFDISQGTYSIDYKLGFVEVIYAPVLKQRSTEELYS
LQSKLPEYFETLSFPLSSLNQFYNKIAKSLN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3n4r-a1-m1-cA 91 91 1.0000 1.0000 1.0000 9.15e-63 3n4r-a1-m1-cA_3n4r-a1-m1-cB
2 3n4r-a1-m1-cB 96 96 1.0000 0.9479 0.9479 1.64e-58 3n4r-a1-m1-cA_3n4r-a1-m1-cB
3 5v3n-a1-m2-cA 109 108 0.9780 0.8165 0.8241 1.13e-52 5v3n-a1-m1-cA_5v3n-a1-m2-cA
4 5v3n-a1-m1-cA 109 108 0.9780 0.8165 0.8241 1.13e-52 5v3n-a1-m1-cA_5v3n-a1-m2-cA
5 6mje-a2-m1-cE 109 96 0.7143 0.5963 0.6771 3.63e-39 6mje-a2-m1-cE_6mje-a2-m1-cC
6 6mje-a2-m1-cC 110 97 0.7143 0.5909 0.6701 4.98e-39 6mje-a2-m1-cE_6mje-a2-m1-cC
7 1u0a-a5-m1-cD 214 57 0.1978 0.0841 0.3158 0.095 1u0a-a5-m1-cB_1u0a-a5-m1-cD, 1u0a-a5-m1-cC_1u0a-a5-m1-cD
8 1u0a-a5-m1-cC 214 57 0.1978 0.0841 0.3158 0.095 1u0a-a5-m1-cC_1u0a-a5-m1-cD
9 1u0a-a5-m1-cB 214 57 0.1978 0.0841 0.3158 0.095 1u0a-a5-m1-cB_1u0a-a5-m1-cD
10 3hg7-a2-m2-cA 310 35 0.1429 0.0419 0.3714 3.2 3hg7-a2-m1-cA_3hg7-a2-m2-cA
11 3hg7-a2-m1-cA 310 35 0.1429 0.0419 0.3714 3.2 3hg7-a2-m1-cA_3hg7-a2-m2-cA
12 6dx9-a1-m1-cB 390 60 0.1758 0.0410 0.2667 9.1 6dx9-a1-m1-cB_6dx9-a1-m1-cA
13 6dx9-a1-m1-cA 391 60 0.1758 0.0409 0.2667 9.1 6dx9-a1-m1-cB_6dx9-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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