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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
NSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAK
VWEKPWLNFKELQEFKHVGDAPA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4tx4-a1-m1-cA 83 83 1.0000 1.0000 1.0000 2.38e-57 4tx4-a1-m1-cB_4tx4-a1-m1-cA
2 4tx4-a1-m1-cB 79 79 0.9518 1.0000 1.0000 6.84e-54 4tx4-a1-m1-cB_4tx4-a1-m1-cA
3 6vlp-a1-m2-cA 80 80 0.7470 0.7750 0.7750 1.39e-43 6vlp-a1-m1-cA_6vlp-a1-m2-cA
4 6vlp-a1-m1-cA 80 80 0.7470 0.7750 0.7750 1.39e-43 6vlp-a1-m1-cA_6vlp-a1-m2-cA
5 5a0o-a1-m1-cS 93 91 0.6867 0.6129 0.6264 2.29e-30 5a0o-a1-m1-cB_5a0o-a1-m1-cS
6 5a0o-a1-m1-cB 93 91 0.6867 0.6129 0.6264 2.29e-30 5a0o-a1-m1-cB_5a0o-a1-m1-cS
7 5ohv-a1-m1-cD 90 89 0.6867 0.6333 0.6404 4.90e-30 5ohv-a1-m1-cB_5ohv-a1-m1-cD
8 5ohv-a1-m1-cB 89 89 0.6867 0.6404 0.6404 6.19e-30 5ohv-a1-m1-cB_5ohv-a1-m1-cD
9 5ohl-a4-m1-cE 89 89 0.6747 0.6292 0.6292 1.35e-29 5ohl-a4-m1-cB_5ohl-a4-m1-cE
10 5ohl-a4-m1-cB 89 89 0.6747 0.6292 0.6292 1.35e-29 5ohl-a4-m1-cB_5ohl-a4-m1-cE
11 3ul5-a1-m1-cA 82 80 0.5783 0.5854 0.6000 1.39e-27 3ul5-a1-m1-cB_3ul5-a1-m1-cA
12 3ul5-a1-m1-cB 81 80 0.5783 0.5926 0.6000 1.51e-27 3ul5-a1-m1-cB_3ul5-a1-m1-cA
13 7c03-a2-m2-cA 312 88 0.5663 0.1506 0.5341 5.67e-16 7c03-a2-m1-cA_7c03-a2-m2-cA
14 7c03-a2-m1-cA 312 88 0.5663 0.1506 0.5341 5.67e-16 7c03-a2-m1-cA_7c03-a2-m2-cA
15 5kux-a2-m2-cA 92 80 0.3494 0.3152 0.3625 1.59e-07 5kux-a2-m1-cA_5kux-a2-m2-cA
16 5kux-a2-m1-cA 92 80 0.3494 0.3152 0.3625 1.59e-07 5kux-a2-m1-cA_5kux-a2-m2-cA
17 5k8r-a1-m2-cA 414 16 0.1205 0.0242 0.6250 8.4 5k8r-a1-m1-cA_5k8r-a1-m2-cA
18 5k8r-a1-m1-cA 414 16 0.1205 0.0242 0.6250 8.4 5k8r-a1-m1-cA_5k8r-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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