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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
NSLEIEELARFAVDEHNKKENALLEFVRVVKAKEQIWEMDASKETMYYLTLEAKDGGKKK
LYEAKVWVKMTHWIGAMNNFKELQEFKPV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ohv-a1-m1-cB 89 89 1.0000 1.0000 1.0000 5.31e-61 5ohv-a1-m1-cB_5ohv-a1-m1-cD
2 5ohv-a1-m1-cD 90 89 1.0000 0.9889 1.0000 5.60e-61 5ohv-a1-m1-cB_5ohv-a1-m1-cD
3 5ohl-a4-m1-cE 89 89 0.8202 0.8202 0.8202 4.04e-45 5ohl-a4-m1-cB_5ohl-a4-m1-cE
4 5ohl-a4-m1-cB 89 89 0.8202 0.8202 0.8202 4.04e-45 5ohl-a4-m1-cB_5ohl-a4-m1-cE
5 5a0o-a1-m1-cS 93 90 0.7978 0.7634 0.7889 1.30e-42 5a0o-a1-m1-cB_5a0o-a1-m1-cS
6 5a0o-a1-m1-cB 93 90 0.7978 0.7634 0.7889 1.30e-42 5a0o-a1-m1-cB_5a0o-a1-m1-cS
7 4tx4-a1-m1-cA 83 89 0.6404 0.6867 0.6404 6.64e-30 4tx4-a1-m1-cB_4tx4-a1-m1-cA
8 4tx4-a1-m1-cB 79 88 0.6292 0.7089 0.6364 5.20e-29 4tx4-a1-m1-cB_4tx4-a1-m1-cA
9 6vlp-a1-m2-cA 80 84 0.5730 0.6375 0.6071 2.00e-25 6vlp-a1-m1-cA_6vlp-a1-m2-cA
10 6vlp-a1-m1-cA 80 84 0.5730 0.6375 0.6071 2.00e-25 6vlp-a1-m1-cA_6vlp-a1-m2-cA
11 7c03-a2-m2-cA 312 88 0.6742 0.1923 0.6818 2.97e-25 7c03-a2-m1-cA_7c03-a2-m2-cA
12 7c03-a2-m1-cA 312 88 0.6742 0.1923 0.6818 2.97e-25 7c03-a2-m1-cA_7c03-a2-m2-cA
13 3ul5-a1-m1-cA 82 90 0.5393 0.5854 0.5333 1.07e-21 3ul5-a1-m1-cB_3ul5-a1-m1-cA
14 3ul5-a1-m1-cB 81 90 0.5393 0.5926 0.5333 1.20e-21 3ul5-a1-m1-cB_3ul5-a1-m1-cA
15 5kux-a2-m2-cA 92 91 0.4157 0.4022 0.4066 4.85e-10 5kux-a2-m1-cA_5kux-a2-m2-cA
16 5kux-a2-m1-cA 92 91 0.4157 0.4022 0.4066 4.85e-10 5kux-a2-m1-cA_5kux-a2-m2-cA
17 3qne-a1-m2-cA 441 38 0.1910 0.0385 0.4474 1.0 3qne-a1-m1-cA_3qne-a1-m2-cA
18 3qne-a1-m1-cA 441 38 0.1910 0.0385 0.4474 1.0 3qne-a1-m1-cA_3qne-a1-m2-cA
19 6vg1-a1-m1-cB 641 56 0.1798 0.0250 0.2857 2.8 6vg1-a1-m1-cB_6vg1-a1-m1-cA
20 6vg1-a1-m1-cA 642 56 0.1798 0.0249 0.2857 2.8 6vg1-a1-m1-cB_6vg1-a1-m1-cA
21 6vfu-a2-m2-cB 411 27 0.1236 0.0268 0.4074 4.6 6vfu-a2-m1-cB_6vfu-a2-m2-cB
22 6vfu-a2-m1-cB 411 27 0.1236 0.0268 0.4074 4.6 6vfu-a2-m1-cB_6vfu-a2-m2-cB
23 5hiz-a1-m1-cB 96 28 0.1236 0.1146 0.3929 7.5 5hiz-a1-m1-cA_5hiz-a1-m1-cB
24 5hiz-a1-m1-cA 96 28 0.1236 0.1146 0.3929 7.5 5hiz-a1-m1-cA_5hiz-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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