HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=89)
NSLEIEELARFAVDEHNKKENALLEFVRVVKAKEQSWKDDELFDTMYYLTLEAKDGGKKK
LYEAKVWVKASGIVMYQMNFKELQEFKPV

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	5ohl-a4-m1-cE	89	89	1.0000	1.0000	1.0000	7.88e-61	5ohl-a4-m1-cB_5ohl-a4-m1-cE
2	5ohl-a4-m1-cB	89	89	1.0000	1.0000	1.0000	7.88e-61	5ohl-a4-m1-cB_5ohl-a4-m1-cE
3	5ohv-a1-m1-cB	89	89	0.8202	0.8202	0.8202	4.04e-45	5ohv-a1-m1-cB_5ohv-a1-m1-cD
4	5ohv-a1-m1-cD	90	89	0.8202	0.8111	0.8202	4.70e-45	5ohv-a1-m1-cB_5ohv-a1-m1-cD
5	5a0o-a1-m1-cS	93	90	0.8090	0.7742	0.8000	1.95e-41	5a0o-a1-m1-cB_5a0o-a1-m1-cS
6	5a0o-a1-m1-cB	93	90	0.8090	0.7742	0.8000	1.95e-41	5a0o-a1-m1-cB_5a0o-a1-m1-cS
7	7c03-a2-m2-cA	312	88	0.6854	0.1955	0.6932	1.60e-30	7c03-a2-m1-cA_7c03-a2-m2-cA
8	7c03-a2-m1-cA	312	88	0.6854	0.1955	0.6932	1.60e-30	7c03-a2-m1-cA_7c03-a2-m2-cA
9	4tx4-a1-m1-cA	83	89	0.6292	0.6747	0.6292	1.45e-29	4tx4-a1-m1-cB_4tx4-a1-m1-cA
10	4tx4-a1-m1-cB	79	88	0.6180	0.6962	0.6250	1.24e-28	4tx4-a1-m1-cB_4tx4-a1-m1-cA
11	6vlp-a1-m2-cA	80	84	0.5730	0.6375	0.6071	7.48e-26	6vlp-a1-m1-cA_6vlp-a1-m2-cA
12	6vlp-a1-m1-cA	80	84	0.5730	0.6375	0.6071	7.48e-26	6vlp-a1-m1-cA_6vlp-a1-m2-cA
13	3ul5-a1-m1-cA	82	90	0.5281	0.5732	0.5222	6.09e-21	3ul5-a1-m1-cB_3ul5-a1-m1-cA
14	3ul5-a1-m1-cB	81	90	0.5281	0.5802	0.5222	6.13e-21	3ul5-a1-m1-cB_3ul5-a1-m1-cA
15	5kux-a2-m2-cA	92	90	0.3933	0.3804	0.3889	1.70e-08	5kux-a2-m1-cA_5kux-a2-m2-cA
16	5kux-a2-m1-cA	92	90	0.3933	0.3804	0.3889	1.70e-08	5kux-a2-m1-cA_5kux-a2-m2-cA
17	7rzw-a1-m1-cA	859	36	0.1348	0.0140	0.3333	4.7	7rzw-a1-m1-cA_7rzw-a1-m1-cB
18	6n4x-a1-m1-cB	487	32	0.1236	0.0226	0.3438	5.6	6n4x-a1-m1-cB_6n4x-a1-m1-cA
19	4rvu-a1-m1-cD	323	43	0.1573	0.0433	0.3256	7.0	4rvu-a1-m1-cD_4rvu-a1-m1-cA
20	4rvu-a1-m1-cA	329	43	0.1573	0.0426	0.3256	7.0	4rvu-a1-m1-cD_4rvu-a1-m1-cA
21	7rzw-a1-m1-cB	864	34	0.1348	0.0139	0.3529	8.6	7rzw-a1-m1-cA_7rzw-a1-m1-cB
22	5hiz-a1-m1-cB	96	28	0.1236	0.1146	0.3929	9.5	5hiz-a1-m1-cA_5hiz-a1-m1-cB
23	5hiz-a1-m1-cA	96	28	0.1236	0.1146	0.3929	9.5	5hiz-a1-m1-cA_5hiz-a1-m1-cB
24	1rtr-a1-m1-cB	271	48	0.1910	0.0627	0.3542	9.7	1rtr-a1-m1-cB_1rtr-a1-m1-cA

[Back]

Reference:
Jacob Schwartz et al.