HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=60)
NSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRG

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	1nwq-a1-m1-cC	60	60	1.0000	1.0000	1.0000	8.83e-36	1nwq-a1-m1-cA_1nwq-a1-m1-cC
2	1nwq-a1-m1-cA	60	60	1.0000	1.0000	1.0000	8.83e-36	1nwq-a1-m1-cA_1nwq-a1-m1-cC
3	7nx5-a1-m1-cA	62	51	0.3167	0.3065	0.3725	0.001	7nx5-a1-m1-cB_7nx5-a1-m1-cA
4	7nx5-a1-m1-cB	61	51	0.3167	0.3115	0.3725	0.002	7nx5-a1-m1-cB_7nx5-a1-m1-cA
5	6hdz-a1-m1-cA	421	55	0.3000	0.0428	0.3273	0.49	6hdz-a1-m1-cB_6hdz-a1-m1-cA
6	2dgc-a1-m2-cA	49	47	0.3000	0.3673	0.3830	1.2	2dgc-a1-m1-cA_2dgc-a1-m2-cA
7	2dgc-a1-m1-cA	49	47	0.3000	0.3673	0.3830	1.2	2dgc-a1-m1-cA_2dgc-a1-m2-cA
8	7fid-a1-m1-cF	779	65	0.3333	0.0257	0.3077	2.5	7fid-a1-m1-cC_7fid-a1-m1-cF
9	7fid-a1-m1-cD	779	65	0.3333	0.0257	0.3077	2.5	7fid-a1-m1-cA_7fid-a1-m1-cD
10	7fid-a1-m1-cC	779	65	0.3333	0.0257	0.3077	2.5	7fid-a1-m1-cC_7fid-a1-m1-cF
11	7fid-a1-m1-cA	779	65	0.3333	0.0257	0.3077	2.5	7fid-a1-m1-cA_7fid-a1-m1-cD
12	7fd4-a1-m1-cF	779	65	0.3333	0.0257	0.3077	2.5	7fd4-a1-m1-cD_7fd4-a1-m1-cF
13	7fd4-a1-m1-cE	779	65	0.3333	0.0257	0.3077	2.5	7fd4-a1-m1-cB_7fd4-a1-m1-cE
14	7fd4-a1-m1-cD	779	65	0.3333	0.0257	0.3077	2.5	7fd4-a1-m1-cD_7fd4-a1-m1-cF
15	7fd4-a1-m1-cB	779	65	0.3333	0.0257	0.3077	2.5	7fd4-a1-m1-cA_7fd4-a1-m1-cB, 7fd4-a1-m1-cB_7fd4-a1-m1-cE
16	7fd4-a1-m1-cA	779	65	0.3333	0.0257	0.3077	2.5	7fd4-a1-m1-cA_7fd4-a1-m1-cB
17	2cwx-a2-m1-cE	408	54	0.2333	0.0343	0.2593	3.0	2cwx-a2-m1-cE_2cwx-a2-m1-cA
18	2cwx-a1-m4-cE	408	54	0.2333	0.0343	0.2593	3.0	2cwx-a1-m2-cE_2cwx-a1-m4-cE
19	2cwx-a1-m2-cE	408	54	0.2333	0.0343	0.2593	3.0	2cwx-a1-m2-cE_2cwx-a1-m4-cE
20	2cwx-a2-m1-cA	414	54	0.2333	0.0338	0.2593	3.4	2cwx-a2-m1-cE_2cwx-a2-m1-cA
21	2d69-a1-m1-cA	424	54	0.2333	0.0330	0.2593	3.4	2d69-a1-m2-cB_2d69-a1-m1-cA
22	7cr9-a1-m1-cA	207	65	0.3333	0.0966	0.3077	3.4	7cr9-a1-m1-cB_7cr9-a1-m1-cA
23	2d69-a1-m2-cB	418	54	0.2333	0.0335	0.2593	3.5	2d69-a1-m2-cB_2d69-a1-m1-cA
24	7cr9-a1-m1-cB	206	65	0.3333	0.0971	0.3077	3.5	7cr9-a1-m1-cB_7cr9-a1-m1-cA
25	2gez-a2-m1-cG	158	37	0.2167	0.0823	0.3514	3.9	2gez-a2-m1-cG_2gez-a2-m1-cE
26	2gez-a2-m1-cE	165	37	0.2167	0.0788	0.3514	4.0	2gez-a2-m1-cG_2gez-a2-m1-cE
27	7qv3-a1-m1-cv	548	35	0.2000	0.0219	0.3429	6.6	7qv3-a1-m1-cv_7qv3-a1-m1-cw
28	7qv3-a1-m1-cw	593	35	0.2000	0.0202	0.3429	6.9	7qv3-a1-m1-cv_7qv3-a1-m1-cw
29	2dq0-a1-m1-cB	447	54	0.2833	0.0380	0.3148	7.2	2dq0-a1-m1-cA_2dq0-a1-m1-cB
30	2dq0-a1-m1-cA	447	54	0.2833	0.0380	0.3148	7.2	2dq0-a1-m1-cA_2dq0-a1-m1-cB
31	3grk-a1-m1-cD	251	21	0.1833	0.0438	0.5238	7.8	3grk-a1-m1-cC_3grk-a1-m1-cD
32	3grk-a2-m1-cH	252	21	0.1833	0.0437	0.5238	7.8	3grk-a2-m1-cF_3grk-a2-m1-cH
33	3grk-a2-m1-cF	252	21	0.1833	0.0437	0.5238	7.8	3grk-a2-m1-cF_3grk-a2-m1-cH, 3grk-a2-m1-cG_3grk-a2-m1-cF
34	3grk-a2-m1-cG	247	21	0.1833	0.0445	0.5238	8.1	3grk-a2-m1-cG_3grk-a2-m1-cF
35	3grk-a1-m1-cC	248	21	0.1833	0.0444	0.5238	8.2	3grk-a1-m1-cC_3grk-a1-m1-cD

[Back]

Reference:
Jacob Schwartz et al.