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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
NSNNWRWFDDRSGRWCSYSASNNSTIDSAWKSGETSVRFTAGRRRYTVQFTTMVQVNEET
GNRRPVMLTLLRVPRLN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6pfl-a1-m2-cB 77 77 1.0000 1.0000 1.0000 2.70e-52 6pfl-a1-m1-cA_6pfl-a1-m2-cB, 6pfl-a1-m1-cB_6pfl-a1-m2-cB, 6pfl-a1-m2-cA_6pfl-a1-m2-cB
2 6pfl-a1-m1-cB 77 77 1.0000 1.0000 1.0000 2.70e-52 6pfl-a1-m1-cB_6pfl-a1-m2-cB
3 6pfl-a1-m2-cA 76 76 0.9870 1.0000 1.0000 1.26e-51 6pfl-a1-m2-cA_6pfl-a1-m2-cB
4 6pfl-a1-m1-cA 76 76 0.9870 1.0000 1.0000 1.26e-51 6pfl-a1-m1-cA_6pfl-a1-m2-cB
5 5ovy-a1-m1-cB 202 65 0.2078 0.0792 0.2462 0.19 5ovy-a1-m1-cA_5ovy-a1-m1-cB
6 5ovy-a1-m1-cA 200 65 0.2078 0.0800 0.2462 0.20 5ovy-a1-m1-cA_5ovy-a1-m1-cB
7 1pix-a2-m2-cB 586 46 0.1558 0.0205 0.2609 0.80 1pix-a2-m1-cA_1pix-a2-m2-cB, 1pix-a2-m1-cB_1pix-a2-m2-cB, 1pix-a2-m2-cA_1pix-a2-m2-cB
8 1pix-a2-m2-cA 586 46 0.1558 0.0205 0.2609 0.80 1pix-a2-m2-cA_1pix-a2-m2-cB
9 1pix-a2-m1-cB 586 46 0.1558 0.0205 0.2609 0.80 1pix-a2-m1-cB_1pix-a2-m2-cB
10 1pix-a2-m1-cA 586 46 0.1558 0.0205 0.2609 0.80 1pix-a2-m1-cA_1pix-a2-m2-cB
11 3gzd-a1-m1-cB 392 46 0.2078 0.0408 0.3478 5.0 3gzd-a1-m1-cB_3gzd-a1-m1-cA
12 3gzd-a1-m1-cA 396 46 0.2078 0.0404 0.3478 5.0 3gzd-a1-m1-cB_3gzd-a1-m1-cA
13 1dof-a1-m1-cD 385 24 0.1299 0.0260 0.4167 7.9 1dof-a1-m1-cA_1dof-a1-m1-cD, 1dof-a1-m1-cB_1dof-a1-m1-cD, 1dof-a1-m1-cC_1dof-a1-m1-cD
14 1dof-a1-m1-cC 385 24 0.1299 0.0260 0.4167 7.9 1dof-a1-m1-cC_1dof-a1-m1-cD
15 1dof-a1-m1-cB 385 24 0.1299 0.0260 0.4167 7.9 1dof-a1-m1-cB_1dof-a1-m1-cD
16 1dof-a1-m1-cA 385 24 0.1299 0.0260 0.4167 7.9 1dof-a1-m1-cA_1dof-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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