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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
NSVHPCCDPVICEPREGEHCISGPCCENCYFLNSGTICKRARGDGNQDYCTGITPDCPRN
RYNV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1rmr-a1-m2-cA 64 64 1.0000 1.0000 1.0000 2.43e-42 1rmr-a1-m1-cA_1rmr-a1-m2-cA
2 1rmr-a1-m1-cA 64 64 1.0000 1.0000 1.0000 2.43e-42 1rmr-a1-m1-cA_1rmr-a1-m2-cA
3 1tej-a2-m2-cA 62 62 0.8438 0.8710 0.8710 5.19e-35 1tej-a2-m1-cA_1tej-a2-m2-cA
4 1tej-a2-m1-cA 62 62 0.8438 0.8710 0.8710 5.19e-35 1tej-a2-m1-cA_1tej-a2-m2-cA
5 1tej-a2-m2-cB 63 63 0.8438 0.8571 0.8571 6.71e-35 1tej-a2-m1-cB_1tej-a2-m2-cB
6 1tej-a2-m1-cB 63 63 0.8438 0.8571 0.8571 6.71e-35 1tej-a2-m1-cB_1tej-a2-m2-cB
7 1z1x-a1-m2-cA 64 63 0.8281 0.8281 0.8413 5.20e-34 1z1x-a1-m1-cA_1z1x-a1-m2-cA
8 1z1x-a1-m1-cA 64 63 0.8281 0.8281 0.8413 5.20e-34 1z1x-a1-m1-cA_1z1x-a1-m2-cA
9 7x4v-a1-m1-cB 64 56 0.4531 0.4531 0.5179 1.22e-13 7x4v-a1-m1-cB_7x4v-a1-m1-cA
10 7x4v-a1-m1-cA 66 56 0.4531 0.4394 0.5179 1.43e-13 7x4v-a1-m1-cB_7x4v-a1-m1-cA
11 2ero-a2-m2-cB 426 54 0.3438 0.0516 0.4074 1.67e-07 2ero-a2-m1-cA_2ero-a2-m2-cB
12 2ero-a2-m1-cA 426 54 0.3438 0.0516 0.4074 1.67e-07 2ero-a2-m1-cA_2ero-a2-m2-cB
13 2ero-a1-m1-cB 426 54 0.3438 0.0516 0.4074 1.67e-07 2ero-a1-m1-cA_2ero-a1-m1-cB
14 2ero-a1-m1-cA 426 54 0.3438 0.0516 0.4074 1.67e-07 2ero-a1-m1-cA_2ero-a1-m1-cB
15 3hdb-a2-m2-cA 417 64 0.3594 0.0552 0.3594 1.99e-07 3hdb-a2-m1-cA_3hdb-a2-m2-cA
16 3hdb-a2-m1-cA 417 64 0.3594 0.0552 0.3594 1.99e-07 3hdb-a2-m1-cA_3hdb-a2-m2-cA
17 3dsl-a1-m1-cB 412 59 0.3281 0.0510 0.3559 1.85e-06 3dsl-a1-m1-cB_3dsl-a1-m1-cA
18 3dsl-a1-m1-cA 416 59 0.3281 0.0505 0.3559 1.89e-06 3dsl-a1-m1-cB_3dsl-a1-m1-cA
19 4ldx-a1-m1-cB 337 21 0.1406 0.0267 0.4286 4.8 4ldx-a1-m1-cA_4ldx-a1-m1-cB
20 4ldx-a1-m1-cA 332 21 0.1406 0.0271 0.4286 4.9 4ldx-a1-m1-cA_4ldx-a1-m1-cB
21 6pen-a1-m1-cE 288 12 0.1250 0.0278 0.6667 8.5 6pen-a1-m1-cF_6pen-a1-m1-cE
22 6pen-a1-m1-cC 288 12 0.1250 0.0278 0.6667 8.5 6pen-a1-m1-cC_6pen-a1-m1-cD
23 6pen-a1-m1-cD 293 12 0.1250 0.0273 0.6667 8.5 6pen-a1-m1-cC_6pen-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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