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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
NSVHPCCDPVKCEPREGEHCISGPCCRNCKFLNAGTICKRAMLDGLHDYCTGVTSDCPRN
RYNH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1z1x-a1-m2-cA 64 64 1.0000 1.0000 1.0000 4.29e-43 1z1x-a1-m1-cA_1z1x-a1-m2-cA
2 1z1x-a1-m1-cA 64 64 1.0000 1.0000 1.0000 4.29e-43 1z1x-a1-m1-cA_1z1x-a1-m2-cA
3 1rmr-a1-m2-cA 64 63 0.8281 0.8281 0.8413 5.20e-34 1rmr-a1-m1-cA_1rmr-a1-m2-cA
4 1rmr-a1-m1-cA 64 63 0.8281 0.8281 0.8413 5.20e-34 1rmr-a1-m1-cA_1rmr-a1-m2-cA
5 1tej-a2-m2-cA 62 62 0.7812 0.8065 0.8065 5.06e-33 1tej-a2-m1-cA_1tej-a2-m2-cA
6 1tej-a2-m1-cA 62 62 0.7812 0.8065 0.8065 5.06e-33 1tej-a2-m1-cA_1tej-a2-m2-cA
7 1tej-a2-m2-cB 63 63 0.7188 0.7302 0.7302 4.78e-29 1tej-a2-m1-cB_1tej-a2-m2-cB
8 1tej-a2-m1-cB 63 63 0.7188 0.7302 0.7302 4.78e-29 1tej-a2-m1-cB_1tej-a2-m2-cB
9 7x4v-a1-m1-cB 64 56 0.4375 0.4375 0.5000 2.18e-12 7x4v-a1-m1-cB_7x4v-a1-m1-cA
10 7x4v-a1-m1-cA 66 56 0.4375 0.4242 0.5000 2.49e-12 7x4v-a1-m1-cB_7x4v-a1-m1-cA
11 3hdb-a2-m2-cA 417 63 0.3750 0.0576 0.3810 2.73e-08 3hdb-a2-m1-cA_3hdb-a2-m2-cA
12 3hdb-a2-m1-cA 417 63 0.3750 0.0576 0.3810 2.73e-08 3hdb-a2-m1-cA_3hdb-a2-m2-cA
13 2ero-a2-m2-cB 426 54 0.3594 0.0540 0.4259 6.92e-08 2ero-a2-m1-cA_2ero-a2-m2-cB
14 2ero-a2-m1-cA 426 54 0.3594 0.0540 0.4259 6.92e-08 2ero-a2-m1-cA_2ero-a2-m2-cB
15 2ero-a1-m1-cB 426 54 0.3594 0.0540 0.4259 6.92e-08 2ero-a1-m1-cA_2ero-a1-m1-cB
16 2ero-a1-m1-cA 426 54 0.3594 0.0540 0.4259 6.92e-08 2ero-a1-m1-cA_2ero-a1-m1-cB
17 3dsl-a1-m1-cA 416 58 0.3438 0.0529 0.3793 2.73e-07 3dsl-a1-m1-cB_3dsl-a1-m1-cA
18 3dsl-a1-m1-cB 412 58 0.3438 0.0534 0.3793 3.10e-07 3dsl-a1-m1-cB_3dsl-a1-m1-cA
19 3g68-a2-m3-cA 334 31 0.1875 0.0359 0.3871 5.1 3g68-a2-m3-cA_3g68-a2-m3-cB
20 3g68-a2-m3-cB 340 31 0.1875 0.0353 0.3871 5.1 3g68-a2-m1-cB_3g68-a2-m3-cB, 3g68-a2-m3-cA_3g68-a2-m3-cB
21 3g68-a2-m1-cB 340 31 0.1875 0.0353 0.3871 5.1 3g68-a2-m1-cB_3g68-a2-m3-cB
22 1asy-a1-m1-cB 490 14 0.1250 0.0163 0.5714 7.1 1asy-a1-m1-cA_1asy-a1-m1-cB
23 1asy-a1-m1-cA 490 14 0.1250 0.0163 0.5714 7.1 1asy-a1-m1-cA_1asy-a1-m1-cB
24 5m9f-a1-m1-cC 210 21 0.1719 0.0524 0.5238 7.5 5m9f-a1-m1-cC_5m9f-a1-m1-cB
25 5m9f-a1-m1-cB 212 21 0.1719 0.0519 0.5238 7.5 5m9f-a1-m1-cC_5m9f-a1-m1-cB
26 4hw5-a3-m1-cB 77 33 0.1719 0.1429 0.3333 8.5 4hw5-a3-m1-cA_4hw5-a3-m1-cB
27 4hw5-a3-m1-cA 77 33 0.1719 0.1429 0.3333 8.5 4hw5-a3-m1-cA_4hw5-a3-m1-cB
28 5u8u-a2-m1-cC 473 57 0.2656 0.0359 0.2982 9.2 5u8u-a2-m1-cC_5u8u-a2-m1-cD
29 5u8u-a2-m1-cD 477 57 0.2656 0.0356 0.2982 9.2 5u8u-a2-m1-cC_5u8u-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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