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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=63)
NSVNPCCDPQTCKPIEGKHCISGPCCENCYFLRSGTICQRARGDGNNDYCTGITPDCPRN
RYN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1tej-a2-m2-cB 63 63 1.0000 1.0000 1.0000 2.60e-41 1tej-a2-m1-cB_1tej-a2-m2-cB
2 1tej-a2-m1-cB 63 63 1.0000 1.0000 1.0000 2.60e-41 1tej-a2-m1-cB_1tej-a2-m2-cB
3 1rmr-a1-m2-cA 64 63 0.8571 0.8438 0.8571 6.61e-35 1rmr-a1-m1-cA_1rmr-a1-m2-cA
4 1rmr-a1-m1-cA 64 63 0.8571 0.8438 0.8571 6.61e-35 1rmr-a1-m1-cA_1rmr-a1-m2-cA
5 1tej-a2-m2-cA 62 62 0.8254 0.8387 0.8387 1.61e-32 1tej-a2-m1-cA_1tej-a2-m2-cA
6 1tej-a2-m1-cA 62 62 0.8254 0.8387 0.8387 1.61e-32 1tej-a2-m1-cA_1tej-a2-m2-cA
7 1z1x-a1-m2-cA 64 63 0.7302 0.7188 0.7302 4.70e-29 1z1x-a1-m1-cA_1z1x-a1-m2-cA
8 1z1x-a1-m1-cA 64 63 0.7302 0.7188 0.7302 4.70e-29 1z1x-a1-m1-cA_1z1x-a1-m2-cA
9 7x4v-a1-m1-cB 64 56 0.5079 0.5000 0.5714 5.16e-15 7x4v-a1-m1-cB_7x4v-a1-m1-cA
10 7x4v-a1-m1-cA 66 56 0.5079 0.4848 0.5714 5.42e-15 7x4v-a1-m1-cB_7x4v-a1-m1-cA
11 3hdb-a2-m2-cA 417 61 0.3968 0.0600 0.4098 3.80e-08 3hdb-a2-m1-cA_3hdb-a2-m2-cA
12 3hdb-a2-m1-cA 417 61 0.3968 0.0600 0.4098 3.80e-08 3hdb-a2-m1-cA_3hdb-a2-m2-cA
13 3dsl-a1-m1-cA 416 61 0.3810 0.0577 0.3934 1.29e-07 3dsl-a1-m1-cB_3dsl-a1-m1-cA
14 3dsl-a1-m1-cB 412 61 0.3810 0.0583 0.3934 1.31e-07 3dsl-a1-m1-cB_3dsl-a1-m1-cA
15 2ero-a2-m2-cB 426 55 0.3651 0.0540 0.4182 5.37e-07 2ero-a2-m1-cA_2ero-a2-m2-cB
16 2ero-a2-m1-cA 426 55 0.3651 0.0540 0.4182 5.37e-07 2ero-a2-m1-cA_2ero-a2-m2-cB
17 2ero-a1-m1-cB 426 55 0.3651 0.0540 0.4182 5.37e-07 2ero-a1-m1-cA_2ero-a1-m1-cB
18 2ero-a1-m1-cA 426 55 0.3651 0.0540 0.4182 5.37e-07 2ero-a1-m1-cA_2ero-a1-m1-cB
19 3bnj-a1-m2-cA 471 43 0.2063 0.0276 0.3023 6.6 3bnj-a1-m1-cA_3bnj-a1-m2-cA
20 3bnj-a1-m1-cA 471 43 0.2063 0.0276 0.3023 6.6 3bnj-a1-m1-cA_3bnj-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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