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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
NTDELKQKYGRVYEIRIEGAEFVFYFTRPKVSDISRFTKELNSKPDMAMKNLTFSCIVPE
QEEELRQAAEEFPGLTFNTASRLMEIVGASAATSLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3fgx-a3-m1-cB 96 96 1.0000 1.0000 1.0000 7.81e-68 3fgx-a3-m1-cA_3fgx-a3-m1-cB
2 3fgx-a3-m1-cA 96 96 1.0000 1.0000 1.0000 7.81e-68 3fgx-a3-m1-cA_3fgx-a3-m1-cB
3 3aff-a1-m4-cB 364 70 0.1979 0.0522 0.2714 0.92 3aff-a1-m4-cB_3aff-a1-m3-cA, 3aff-a1-m4-cB_3aff-a1-m4-cA
4 3aff-a1-m4-cA 366 70 0.1979 0.0519 0.2714 0.92 3aff-a1-m2-cA_3aff-a1-m4-cA, 3aff-a1-m4-cB_3aff-a1-m4-cA
5 3aff-a1-m3-cA 366 70 0.1979 0.0519 0.2714 0.92 3aff-a1-m4-cB_3aff-a1-m3-cA
6 3aff-a1-m2-cA 366 70 0.1979 0.0519 0.2714 0.92 3aff-a1-m2-cA_3aff-a1-m4-cA
7 3afe-a1-m1-cD 379 70 0.1979 0.0501 0.2714 0.93 3afe-a1-m1-cD_3afe-a1-m1-cC
8 3afe-a1-m1-cC 381 70 0.1979 0.0499 0.2714 0.93 3afe-a1-m1-cD_3afe-a1-m1-cC
9 4kms-a1-m2-cA 236 53 0.1875 0.0763 0.3396 1.7 4kms-a1-m2-cB_4kms-a1-m2-cA
10 5xxz-a1-m1-cB 1285 17 0.0938 0.0070 0.5294 4.5 5xxz-a1-m1-cB_5xxz-a1-m1-cA
11 5xxz-a1-m1-cA 1309 17 0.0938 0.0069 0.5294 4.5 5xxz-a1-m1-cB_5xxz-a1-m1-cA
12 3qa8-a2-m1-cH 541 30 0.1354 0.0240 0.4333 5.2 3qa8-a2-m1-cH_3qa8-a2-m1-cE
13 2o74-a3-m1-cE 164 29 0.1146 0.0671 0.3793 5.4 2o74-a3-m1-cE_2o74-a3-m1-cF
14 1x9g-a1-m4-cA 192 60 0.1667 0.0833 0.2667 5.6 1x9g-a1-m2-cA_1x9g-a1-m4-cA
15 1x9g-a1-m2-cA 192 60 0.1667 0.0833 0.2667 5.6 1x9g-a1-m2-cA_1x9g-a1-m4-cA
16 2o74-a3-m1-cF 168 29 0.1146 0.0655 0.3793 6.0 2o74-a3-m1-cE_2o74-a3-m1-cF
17 3qa8-a2-m1-cF 622 30 0.1354 0.0209 0.4333 7.0 3qa8-a2-m1-cE_3qa8-a2-m1-cF
18 3qa8-a2-m1-cE 622 30 0.1354 0.0209 0.4333 7.0 3qa8-a2-m1-cE_3qa8-a2-m1-cF, 3qa8-a2-m1-cH_3qa8-a2-m1-cE

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Reference:
Jacob Schwartz et al.

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