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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
NTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSVHL
VKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPKES

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1r1v-a3-m2-cB 96 96 1.0000 1.0000 1.0000 3.09e-66 1r1v-a3-m2-cA_1r1v-a3-m2-cB
2 2kjb-a1-m1-cB 95 95 0.9896 1.0000 1.0000 1.11e-65 2kjb-a1-m1-cA_2kjb-a1-m1-cB
3 2kjb-a1-m1-cA 95 95 0.9896 1.0000 1.0000 1.11e-65 2kjb-a1-m1-cA_2kjb-a1-m1-cB
4 1r1v-a3-m2-cA 95 95 0.9896 1.0000 1.0000 1.11e-65 1r1v-a3-m2-cA_1r1v-a3-m2-cB
5 6cdb-a3-m3-cA 97 94 0.9688 0.9588 0.9894 2.75e-64 6cdb-a3-m4-cB_6cdb-a3-m3-cA
6 6cdb-a3-m4-cB 95 94 0.9688 0.9789 0.9894 2.95e-64 6cdb-a3-m2-cB_6cdb-a3-m4-cB, 6cdb-a3-m4-cB_6cdb-a3-m3-cA
7 6cdb-a3-m2-cB 95 94 0.9688 0.9789 0.9894 2.95e-64 6cdb-a3-m2-cB_6cdb-a3-m4-cB
8 2lkp-a1-m1-cB 119 86 0.3333 0.2689 0.3721 1.92e-14 2lkp-a1-m1-cA_2lkp-a1-m1-cB
9 2lkp-a1-m1-cA 119 86 0.3333 0.2689 0.3721 1.92e-14 2lkp-a1-m1-cA_2lkp-a1-m1-cB
10 6jmi-a1-m1-cA 100 79 0.3438 0.3300 0.4177 1.33e-12 6jmi-a1-m1-cD_6jmi-a1-m1-cA
11 1r23-a1-m1-cB 97 88 0.3229 0.3196 0.3523 1.52e-10 1r23-a1-m1-cB_1r23-a1-m1-cA
12 1r23-a1-m1-cA 104 88 0.3229 0.2981 0.3523 1.84e-10 1r23-a1-m1-cB_1r23-a1-m1-cA
13 4ooi-a1-m1-cB 96 74 0.2604 0.2604 0.3378 3.75e-09 4ooi-a1-m1-cA_4ooi-a1-m1-cB
14 4ooi-a1-m1-cA 95 74 0.2604 0.2632 0.3378 4.18e-09 4ooi-a1-m1-cA_4ooi-a1-m1-cB
15 6o8l-a1-m2-cA 92 74 0.2708 0.2826 0.3514 1.40e-08 6o8l-a1-m1-cA_6o8l-a1-m2-cA
16 6o8l-a1-m1-cA 92 74 0.2708 0.2826 0.3514 1.40e-08 6o8l-a1-m1-cA_6o8l-a1-m2-cA
17 2jsc-a1-m1-cA 96 81 0.2708 0.2708 0.3210 1.89e-08 2jsc-a1-m1-cA_2jsc-a1-m1-cB
18 2jsc-a1-m1-cB 97 81 0.2708 0.2680 0.3210 2.10e-08 2jsc-a1-m1-cA_2jsc-a1-m1-cB
19 7p6f-a3-m3-cDDD 97 74 0.2292 0.2268 0.2973 1.80e-07 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
20 7p6f-a3-m1-cDDD 97 74 0.2292 0.2268 0.2973 1.80e-07 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
21 3gw2-a1-m2-cA 92 80 0.2812 0.2935 0.3375 2.64e-05 3gw2-a1-m1-cA_3gw2-a1-m2-cA
22 3gw2-a1-m1-cA 92 80 0.2812 0.2935 0.3375 2.64e-05 3gw2-a1-m1-cA_3gw2-a1-m2-cA
23 4omz-a2-m1-cC 100 68 0.2188 0.2100 0.3088 3.50e-05 4omz-a2-m1-cD_4omz-a2-m1-cC
24 4omz-a2-m1-cD 98 68 0.2188 0.2143 0.3088 3.60e-05 4omz-a2-m1-cD_4omz-a2-m1-cC
25 6j0e-a1-m1-cA 124 75 0.2188 0.1694 0.2800 1.63e-04 6j0e-a1-m1-cA_6j0e-a1-m1-cB
26 6j0e-a1-m1-cB 125 75 0.2188 0.1680 0.2800 1.68e-04 6j0e-a1-m1-cA_6j0e-a1-m1-cB
27 6jmi-a1-m1-cD 83 53 0.2396 0.2771 0.4340 4.39e-04 6jmi-a1-m1-cD_6jmi-a1-m1-cA
28 3jth-a1-m1-cB 88 49 0.1875 0.2045 0.3673 0.003 3jth-a1-m1-cB_3jth-a1-m1-cA
29 3jth-a1-m1-cA 92 49 0.1875 0.1957 0.3673 0.003 3jth-a1-m1-cB_3jth-a1-m1-cA
30 2p4w-a1-m1-cA 197 59 0.1667 0.0812 0.2712 0.17 2p4w-a1-m1-cA_2p4w-a1-m1-cB
31 2p4w-a1-m1-cB 198 59 0.1667 0.0808 0.2712 0.18 2p4w-a1-m1-cA_2p4w-a1-m1-cB
32 2zkz-a1-m1-cB 82 82 0.2708 0.3171 0.3171 0.72 2zkz-a1-m1-cA_2zkz-a1-m1-cB
33 2zkz-a1-m1-cA 82 82 0.2708 0.3171 0.3171 0.72 2zkz-a1-m1-cA_2zkz-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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