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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
NTGFLRGACIKTGDRFRVKIGYNQELIAVFKSLPSRHYDSFTKTWDFSMSDYRALMKAVE
RLSTVSLKPL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4o66-a6-m1-cD 70 70 1.0000 1.0000 1.0000 1.36e-48 4o66-a6-m1-cC_4o66-a6-m1-cD
2 4o66-a6-m1-cC 70 70 1.0000 1.0000 1.0000 1.36e-48 4o66-a6-m1-cC_4o66-a6-m1-cD
3 4cq6-a1-m1-cC 174 44 0.1857 0.0747 0.2955 2.2 4cq6-a1-m1-cB_4cq6-a1-m1-cC
4 4cq6-a1-m1-cB 174 44 0.1857 0.0747 0.2955 2.2 4cq6-a1-m1-cB_4cq6-a1-m1-cC
5 2iop-a5-m1-cB 615 35 0.2143 0.0244 0.4286 8.5 2iop-a5-m1-cC_2iop-a5-m1-cB
6 2iop-a3-m1-cB 615 35 0.2143 0.0244 0.4286 8.5 2iop-a3-m1-cD_2iop-a3-m1-cB
7 4n40-a2-m3-cA 270 41 0.1714 0.0444 0.2927 8.7 4n40-a2-m2-cA_4n40-a2-m3-cA
8 4n40-a2-m2-cA 270 41 0.1714 0.0444 0.2927 8.7 4n40-a2-m2-cA_4n40-a2-m3-cA
9 1wmi-a3-m3-cC 88 32 0.1571 0.1250 0.3438 8.7 1wmi-a3-m1-cA_1wmi-a3-m3-cC
10 1wmi-a3-m1-cA 88 32 0.1571 0.1250 0.3438 8.7 1wmi-a3-m1-cA_1wmi-a3-m3-cC
11 2iop-a5-m1-cC 606 35 0.2143 0.0248 0.4286 8.7 2iop-a5-m1-cC_2iop-a5-m1-cB
12 2iop-a3-m1-cC 606 35 0.2143 0.0248 0.4286 8.7 2iop-a3-m1-cD_2iop-a3-m1-cC
13 2iop-a3-m1-cD 604 35 0.2143 0.0248 0.4286 9.0 2iop-a3-m1-cD_2iop-a3-m1-cB, 2iop-a3-m1-cD_2iop-a3-m1-cC
14 1y4u-a1-m1-cA 472 35 0.2143 0.0318 0.4286 9.0 1y4u-a1-m1-cB_1y4u-a1-m1-cA
15 2ioq-a2-m3-cB 577 35 0.2143 0.0260 0.4286 9.0 2ioq-a2-m1-cB_2ioq-a2-m3-cB
16 2ioq-a2-m1-cB 577 35 0.2143 0.0260 0.4286 9.0 2ioq-a2-m1-cB_2ioq-a2-m3-cB
17 1y4u-a1-m1-cB 454 35 0.2143 0.0330 0.4286 9.3 1y4u-a1-m1-cB_1y4u-a1-m1-cA
18 1y4s-a1-m1-cB 475 35 0.2143 0.0316 0.4286 9.4 1y4s-a1-m1-cA_1y4s-a1-m1-cB
19 1y4s-a1-m1-cA 475 35 0.2143 0.0316 0.4286 9.4 1y4s-a1-m1-cA_1y4s-a1-m1-cB
20 7som-a1-m1-cE 1516 23 0.1286 0.0059 0.3913 9.5 7som-a1-m1-cD_7som-a1-m1-cE
21 7som-a1-m1-cD 1516 23 0.1286 0.0059 0.3913 9.5 7som-a1-m1-cD_7som-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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