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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
NTLELSARVLECGARHTPAGLPALELLLVHESEVVEAGRRVELTISAVALGDLALLLADT
PLGTEQVQGFLAPARKDSVKVKLHLQQARRIAGSGR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3fhw-a1-m1-cB 96 96 1.0000 1.0000 1.0000 3.52e-63 3fhw-a1-m1-cA_3fhw-a1-m1-cB
2 3fhw-a1-m1-cA 96 96 1.0000 1.0000 1.0000 3.52e-63 3fhw-a1-m1-cA_3fhw-a1-m1-cB
3 3k8a-a1-m1-cA 100 81 0.3021 0.2900 0.3580 8.34e-07 3k8a-a1-m1-cA_3k8a-a1-m1-cB
4 3k8a-a1-m1-cB 103 81 0.3021 0.2816 0.3580 8.55e-07 3k8a-a1-m1-cA_3k8a-a1-m1-cB
5 4fdb-a1-m2-cA 92 77 0.2708 0.2826 0.3377 1.90e-05 4fdb-a1-m1-cA_4fdb-a1-m2-cA
6 4fdb-a1-m1-cA 92 77 0.2708 0.2826 0.3377 1.90e-05 4fdb-a1-m1-cA_4fdb-a1-m2-cA
7 2c12-a2-m2-cF 430 50 0.2188 0.0488 0.4200 0.60 2c12-a2-m1-cE_2c12-a2-m2-cF, 2c12-a2-m1-cF_2c12-a2-m2-cF, 2c12-a2-m2-cE_2c12-a2-m2-cF
8 2c12-a2-m2-cE 430 50 0.2188 0.0488 0.4200 0.60 2c12-a2-m2-cE_2c12-a2-m2-cF
9 2c12-a2-m1-cF 430 50 0.2188 0.0488 0.4200 0.60 2c12-a2-m1-cF_2c12-a2-m2-cF
10 2c12-a2-m1-cE 430 50 0.2188 0.0488 0.4200 0.60 2c12-a2-m1-cE_2c12-a2-m2-cF
11 4apv-a1-m2-cA 97 92 0.2812 0.2784 0.2935 2.2 4apv-a1-m1-cA_4apv-a1-m2-cA
12 4apv-a1-m1-cA 97 92 0.2812 0.2784 0.2935 2.2 4apv-a1-m1-cA_4apv-a1-m2-cA
13 1nf2-a4-m2-cB 267 44 0.1771 0.0637 0.3864 3.6 1nf2-a4-m2-cA_1nf2-a4-m2-cB
14 1nf2-a4-m2-cA 267 44 0.1771 0.0637 0.3864 3.6 1nf2-a4-m2-cA_1nf2-a4-m2-cB
15 1woc-a1-m1-cD 97 92 0.2708 0.2680 0.2826 4.8 1woc-a1-m1-cB_1woc-a1-m1-cD
16 1woc-a1-m1-cB 97 92 0.2708 0.2680 0.2826 4.8 1woc-a1-m1-cB_1woc-a1-m1-cD
17 2y0d-a1-m1-cD 453 31 0.1354 0.0287 0.4194 8.1 2y0d-a1-m1-cB_2y0d-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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