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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=29)
NTNVTPHLLAGMRLIDPLRVLGEYLIEQS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ven-a1-m1-cQ 29 29 1.0000 1.0000 1.0000 1.96e-15 6ven-a1-m1-cQ_6ven-a1-m1-cP
2 6ven-a1-m1-cP 42 35 1.0000 0.6905 0.8286 4.56e-13 6ven-a1-m1-cQ_6ven-a1-m1-cP
3 6bx3-a1-m1-cN 40 35 1.0000 0.7250 0.8286 6.04e-13 6bx3-a1-m1-cN_6bx3-a1-m1-cM
4 6bx3-a1-m1-cM 42 35 1.0000 0.6905 0.8286 6.34e-13 6bx3-a1-m1-cN_6bx3-a1-m1-cM
5 4uqv-a5-m1-cG 429 19 0.3448 0.0233 0.5263 3.5 4uqv-a5-m1-cH_4uqv-a5-m1-cG
6 1xeb-a9-m1-cA 146 20 0.3448 0.0685 0.5000 4.3 1xeb-a9-m1-cD_1xeb-a9-m1-cA
7 1xeb-a9-m1-cD 145 20 0.3448 0.0690 0.5000 4.4 1xeb-a9-m1-cD_1xeb-a9-m1-cA
8 1t8w-a1-m1-cC 457 22 0.3448 0.0219 0.4545 8.6 1t8w-a1-m1-cB_1t8w-a1-m1-cC
9 1t8w-a1-m1-cB 457 22 0.3448 0.0219 0.4545 8.6 1t8w-a1-m1-cB_1t8w-a1-m1-cC
10 1t8s-a1-m1-cF 439 22 0.3448 0.0228 0.4545 8.7 1t8s-a1-m1-cE_1t8s-a1-m1-cF
11 1t8s-a1-m1-cE 439 22 0.3448 0.0228 0.4545 8.7 1t8s-a1-m1-cE_1t8s-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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