Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
NVSSVARREKELYDQIADLTDKNGEYLERIGELEERQKNLEKLEHQSQVAADKHYQEQAK
KHQEYKQEQEE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5hzp-a1-m1-cC 71 71 1.0000 1.0000 1.0000 8.55e-45 5hzp-a1-m1-cA_5hzp-a1-m1-cC
2 5hzp-a1-m1-cA 71 71 1.0000 1.0000 1.0000 8.55e-45 5hzp-a1-m1-cA_5hzp-a1-m1-cC
3 7vq5-a1-m1-cB 400 52 0.2394 0.0425 0.3269 0.17 7vq5-a1-m1-cA_7vq5-a1-m1-cB
4 7vq5-a1-m1-cA 400 52 0.2394 0.0425 0.3269 0.17 7vq5-a1-m1-cA_7vq5-a1-m1-cB
5 5vk4-a1-m1-cB 330 37 0.2113 0.0455 0.4054 0.24 5vk4-a1-m1-cA_5vk4-a1-m1-cB
6 5vk4-a1-m1-cA 324 37 0.2113 0.0463 0.4054 0.29 5vk4-a1-m1-cA_5vk4-a1-m1-cB
7 7kog-a1-m1-cB 1077 40 0.2254 0.0149 0.4000 0.77 7kog-a1-m1-cA_7kog-a1-m1-cB
8 7kog-a1-m1-cA 1077 40 0.2254 0.0149 0.4000 0.77 7kog-a1-m1-cA_7kog-a1-m1-cB
9 3mm5-a1-m1-cD 417 35 0.2113 0.0360 0.4286 1.3 3mm5-a1-m1-cA_3mm5-a1-m1-cD
10 3mm5-a1-m1-cA 417 35 0.2113 0.0360 0.4286 1.3 3mm5-a1-m1-cA_3mm5-a1-m1-cD
11 3ztv-a1-m2-cA 565 71 0.2676 0.0336 0.2676 2.6 3ztv-a1-m1-cA_3ztv-a1-m2-cA
12 3ztv-a1-m1-cA 565 71 0.2676 0.0336 0.2676 2.6 3ztv-a1-m1-cA_3ztv-a1-m2-cA
13 6m37-a1-m2-cA 113 53 0.2535 0.1593 0.3396 4.0 6m37-a1-m1-cA_6m37-a1-m2-cA, 6m37-a1-m2-cA_6m37-a1-m2-cC
14 6m37-a1-m1-cA 113 53 0.2535 0.1593 0.3396 4.0 6m37-a1-m1-cA_6m37-a1-m2-cA
15 5i0q-a1-m2-cA 34 30 0.1690 0.3529 0.4000 4.2 5i0q-a1-m1-cA_5i0q-a1-m2-cA
16 5i0q-a1-m1-cA 34 30 0.1690 0.3529 0.4000 4.2 5i0q-a1-m1-cA_5i0q-a1-m2-cA
17 6m37-a1-m2-cC 115 53 0.2535 0.1565 0.3396 4.3 6m37-a1-m2-cA_6m37-a1-m2-cC
18 5z8b-a2-m1-cA 209 63 0.2958 0.1005 0.3333 4.5 5z8b-a2-m2-cB_5z8b-a2-m1-cA
19 5z8b-a1-m1-cA 209 63 0.2958 0.1005 0.3333 4.5 5z8b-a1-m1-cB_5z8b-a1-m1-cA
20 5z8b-a2-m2-cB 204 63 0.2958 0.1029 0.3333 4.6 5z8b-a2-m2-cB_5z8b-a2-m1-cA
21 5z8b-a1-m1-cB 204 63 0.2958 0.1029 0.3333 4.6 5z8b-a1-m1-cB_5z8b-a1-m1-cA
22 2pnv-a3-m8-cB 39 29 0.1408 0.2564 0.3448 9.8 2pnv-a3-m7-cB_2pnv-a3-m8-cB
23 2pnv-a3-m7-cB 39 29 0.1408 0.2564 0.3448 9.8 2pnv-a3-m7-cB_2pnv-a3-m8-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600