HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=86)
NVVYIGNKPVMNYVLAVVTQMNGGTSEVILKARGIAISRAVDVAEIVRNRFIPDIQIENI
DICTEEIIGNEGTATNVSAIEIQLRK

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	3toe-a1-m1-cB	86	86	1.0000	1.0000	1.0000	1.29e-56	3toe-a1-m1-cA_3toe-a1-m1-cB
2	3toe-a1-m1-cA	86	86	1.0000	1.0000	1.0000	1.29e-56	3toe-a1-m1-cA_3toe-a1-m1-cB
3	1nfj-a1-m4-cA	87	86	0.6395	0.6322	0.6395	4.21e-34	1nfj-a1-m1-cA_1nfj-a1-m4-cA
4	1nfj-a1-m3-cA	87	86	0.6395	0.6322	0.6395	4.21e-34	1nfj-a1-m1-cA_1nfj-a1-m3-cA
5	1nfj-a1-m1-cA	87	86	0.6395	0.6322	0.6395	4.21e-34	1nfj-a1-m1-cA_1nfj-a1-m3-cA, 1nfj-a1-m1-cA_1nfj-a1-m4-cA
6	1nfh-a1-m2-cB	86	86	0.6395	0.6395	0.6395	4.23e-34	1nfh-a1-m1-cA_1nfh-a1-m2-cB
7	1nfh-a1-m1-cA	86	86	0.6395	0.6395	0.6395	4.23e-34	1nfh-a1-m1-cA_1nfh-a1-m2-cB
8	2z7c-a2-m1-cD	92	85	0.6279	0.5870	0.6353	2.83e-30	2z7c-a2-m1-cC_2z7c-a2-m1-cD
9	2z7c-a2-m1-cC	89	85	0.6279	0.6067	0.6353	2.84e-30	2z7c-a2-m1-cC_2z7c-a2-m1-cD
10	4z9e-a2-m1-cD	85	86	0.5465	0.5529	0.5465	1.95e-28	4z9e-a2-m1-cC_4z9e-a2-m1-cD
11	4z9e-a2-m1-cC	85	86	0.5465	0.5529	0.5465	1.95e-28	4z9e-a2-m1-cC_4z9e-a2-m1-cD
12	2bky-a1-m1-cB	89	87	0.5698	0.5506	0.5632	1.97e-28	2bky-a1-m1-cA_2bky-a1-m1-cB
13	2bky-a1-m1-cA	89	87	0.5698	0.5506	0.5632	1.97e-28	2bky-a1-m1-cA_2bky-a1-m1-cB
14	1h0x-a1-m1-cB	89	87	0.5698	0.5506	0.5632	1.97e-28	1h0x-a1-m1-cA_1h0x-a1-m1-cB
15	1h0x-a1-m1-cA	89	87	0.5698	0.5506	0.5632	1.97e-28	1h0x-a1-m1-cA_1h0x-a1-m1-cB
16	3wbm-a1-m1-cC	86	87	0.5581	0.5581	0.5517	7.32e-25	3wbm-a1-m1-cA_3wbm-a1-m1-cC
17	3wbm-a1-m1-cA	86	87	0.5581	0.5581	0.5517	7.32e-25	3wbm-a1-m1-cA_3wbm-a1-m1-cC
18	3u6y-a1-m1-cC	99	89	0.5233	0.4545	0.5056	1.35e-18	3u6y-a1-m1-cA_3u6y-a1-m1-cC
19	3u6y-a1-m1-cA	99	89	0.5233	0.4545	0.5056	1.35e-18	3u6y-a1-m1-cA_3u6y-a1-m1-cC
20	2bky-a1-m1-cY	86	58	0.2674	0.2674	0.3966	4.68e-06	2bky-a1-m1-cX_2bky-a1-m1-cY
21	2bky-a1-m1-cX	86	58	0.2674	0.2674	0.3966	4.68e-06	2bky-a1-m1-cX_2bky-a1-m1-cY
22	1udv-a1-m1-cB	86	58	0.2674	0.2674	0.3966	4.68e-06	1udv-a1-m1-cB_1udv-a1-m1-cA
23	1udv-a1-m1-cA	88	58	0.2674	0.2614	0.3966	4.97e-06	1udv-a1-m1-cB_1udv-a1-m1-cA

[Back]

Reference:
Jacob Schwartz et al.