Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=72)
NYDDINVKVDFILLEKNMTINELKMYVENELFKFPDDIVKHVNIKVNGSLVGHGELVSIE
DGYGIEISSWMV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4tt9-a2-m1-cC 72 72 1.0000 1.0000 1.0000 2.01e-46 4tt9-a2-m1-cD_4tt9-a2-m1-cC
2 4tt9-a2-m1-cD 68 70 0.9444 1.0000 0.9714 3.00e-41 4tt9-a2-m1-cD_4tt9-a2-m1-cC
3 4yx1-a1-m1-cB 65 67 0.3611 0.4000 0.3881 9.21e-08 4yx1-a1-m1-cB_4yx1-a1-m1-cA
4 4yx1-a1-m1-cA 66 67 0.3611 0.3939 0.3881 9.22e-08 4yx1-a1-m1-cB_4yx1-a1-m1-cA
5 1yab-a3-m2-cA 85 65 0.2639 0.2235 0.2923 0.003 1yab-a3-m2-cA_1yab-a3-m2-cB
6 1yab-a3-m1-cA 85 65 0.2639 0.2235 0.2923 0.003 1yab-a3-m1-cA_1yab-a3-m2-cB
7 1yab-a3-m2-cB 87 65 0.2639 0.2184 0.2923 0.003 1yab-a3-m1-cA_1yab-a3-m2-cB, 1yab-a3-m2-cA_1yab-a3-m2-cB
8 4yxb-a1-m1-cA 157 65 0.2778 0.1274 0.3077 0.006 4yxb-a1-m1-cA_4yxb-a1-m1-cB
9 4yxb-a1-m1-cB 169 65 0.2778 0.1183 0.3077 0.007 4yxb-a1-m1-cA_4yxb-a1-m1-cB
10 3uep-a1-m1-cB 85 67 0.2361 0.2000 0.2537 0.078 3uep-a1-m1-cA_3uep-a1-m1-cB
11 3uep-a1-m1-cA 85 67 0.2361 0.2000 0.2537 0.078 3uep-a1-m1-cA_3uep-a1-m1-cB
12 6ms3-a1-m1-cB 511 48 0.2083 0.0294 0.3125 3.2 6ms3-a1-m1-cB_6ms3-a1-m1-cA
13 6ms3-a1-m1-cA 512 48 0.2083 0.0293 0.3125 3.2 6ms3-a1-m1-cB_6ms3-a1-m1-cA
14 3kfw-a1-m4-cX 223 36 0.1806 0.0583 0.3611 9.9 3kfw-a1-m1-cX_3kfw-a1-m4-cX, 3kfw-a1-m2-cX_3kfw-a1-m4-cX
15 3kfw-a1-m2-cX 223 36 0.1806 0.0583 0.3611 9.9 3kfw-a1-m2-cX_3kfw-a1-m4-cX
16 3kfw-a1-m1-cX 223 36 0.1806 0.0583 0.3611 9.9 3kfw-a1-m1-cX_3kfw-a1-m4-cX

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600