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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
NYFIVEVSEQEVKREKEKARELRRSQWWKNRIARGICHYCGEIFPPEELTDHLVPVVRGG
KSTRGNVVPACKECNNRKKYLLPVEWEEYLDSLES

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4h9d-a1-m1-cA 95 95 1.0000 1.0000 1.0000 1.01e-66 4h9d-a1-m1-cB_4h9d-a1-m1-cA
2 4h9d-a1-m1-cB 89 89 0.9368 1.0000 1.0000 9.04e-62 4h9d-a1-m1-cB_4h9d-a1-m1-cA, 4h9d-a1-m1-cC_4h9d-a1-m1-cB
3 4h9d-a1-m1-cC 80 80 0.8421 1.0000 1.0000 7.59e-56 4h9d-a1-m1-cC_4h9d-a1-m1-cB
4 6ghc-a1-m1-cB 286 60 0.1895 0.0629 0.3000 0.006 6ghc-a1-m1-cA_6ghc-a1-m1-cB
5 6ghc-a1-m1-cA 283 60 0.1895 0.0636 0.3000 0.006 6ghc-a1-m1-cA_6ghc-a1-m1-cB
6 3exi-a1-m2-cA 332 58 0.2211 0.0633 0.3621 0.25 3exi-a1-m1-cA_3exi-a1-m2-cA
7 3exi-a1-m1-cA 332 58 0.2211 0.0633 0.3621 0.25 3exi-a1-m1-cA_3exi-a1-m2-cA
8 3exg-a1-m1-cC 342 58 0.2211 0.0614 0.3621 0.49 3exg-a1-m1-cA_3exg-a1-m1-cC
9 3exg-a1-m1-cA 342 58 0.2211 0.0614 0.3621 0.49 3exg-a1-m1-cA_3exg-a1-m1-cC
10 1wu7-a1-m1-cB 407 49 0.1368 0.0319 0.2653 2.5 1wu7-a1-m1-cB_1wu7-a1-m1-cA
11 1wu7-a1-m1-cA 411 49 0.1368 0.0316 0.2653 2.5 1wu7-a1-m1-cB_1wu7-a1-m1-cA
12 5t67-a1-m1-cA 405 24 0.1158 0.0272 0.4583 3.7 5t67-a1-m1-cB_5t67-a1-m1-cA
13 5t67-a1-m1-cB 402 24 0.1158 0.0274 0.4583 3.7 5t67-a1-m1-cB_5t67-a1-m1-cA
14 8gxl-a1-m1-cA 119 46 0.1474 0.1176 0.3043 6.9 8gxl-a1-m1-cA_8gxl-a1-m1-cB
15 5fvm-a1-m1-cB 2117 16 0.0842 0.0038 0.5000 8.9 5fvm-a1-m1-cA_5fvm-a1-m1-cB
16 5fvm-a1-m1-cA 2117 16 0.0842 0.0038 0.5000 8.9 5fvm-a1-m1-cA_5fvm-a1-m1-cB
17 3h87-a1-m2-cB 138 14 0.0842 0.0580 0.5714 9.4 3h87-a1-m2-cA_3h87-a1-m2-cB
18 3h87-a1-m2-cA 136 14 0.0842 0.0588 0.5714 9.6 3h87-a1-m2-cA_3h87-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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