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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
NYFQGHMQIDSIEIGGKVYQFFKSDLGNAPLLFIKGSKGYACGYLNETSNKVGDIAVRVG
VKTLDDLSAKVVEASQEAQKVGINPGDVLRNVIDKLG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1qw2-a1-m4-cA 97 97 1.0000 1.0000 1.0000 4.18e-67 1qw2-a1-m1-cA_1qw2-a1-m4-cA, 1qw2-a1-m3-cA_1qw2-a1-m4-cA
2 1qw2-a1-m3-cA 97 97 1.0000 1.0000 1.0000 4.18e-67 1qw2-a1-m3-cA_1qw2-a1-m4-cA
3 1qw2-a1-m1-cA 97 97 1.0000 1.0000 1.0000 4.18e-67 1qw2-a1-m1-cA_1qw2-a1-m4-cA
4 2ekg-a1-m1-cB 298 85 0.2577 0.0839 0.2941 0.48 2ekg-a1-m1-cA_2ekg-a1-m1-cB
5 1ztv-a1-m1-cA 279 63 0.1753 0.0609 0.2698 2.1 1ztv-a1-m1-cB_1ztv-a1-m1-cA
6 1ztv-a1-m1-cB 275 63 0.1753 0.0618 0.2698 2.7 1ztv-a1-m1-cB_1ztv-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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