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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
PADEEASAFRAVADPTRRQILEDLRGGELAAGEIAGRFPISAPSISRHLGVLKGAGLVTE
RRDANRILYSLAEERLALCVGRFLSAVCPEQIVLRTT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7p6f-a3-m3-cDDD 97 97 1.0000 1.0000 1.0000 5.72e-65 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
2 7p6f-a3-m1-cDDD 97 97 1.0000 1.0000 1.0000 5.72e-65 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
3 3pqk-a3-m1-cE 100 90 0.2887 0.2800 0.3111 7.33e-11 3pqk-a3-m1-cF_3pqk-a3-m1-cE
4 3pqk-a3-m1-cF 99 90 0.2887 0.2828 0.3111 7.82e-11 3pqk-a3-m1-cF_3pqk-a3-m1-cE
5 2jsc-a1-m1-cA 96 78 0.2887 0.2917 0.3590 1.49e-10 2jsc-a1-m1-cA_2jsc-a1-m1-cB
6 4ooi-a1-m1-cB 96 64 0.2474 0.2500 0.3750 1.56e-10 4ooi-a1-m1-cA_4ooi-a1-m1-cB
7 4ooi-a1-m1-cA 95 64 0.2474 0.2526 0.3750 1.59e-10 4ooi-a1-m1-cA_4ooi-a1-m1-cB
8 3f6v-a1-m2-cA 96 78 0.3299 0.3333 0.4103 1.59e-10 3f6v-a1-m1-cA_3f6v-a1-m2-cA
9 3f6v-a1-m1-cA 96 78 0.3299 0.3333 0.4103 1.59e-10 3f6v-a1-m1-cA_3f6v-a1-m2-cA
10 2jsc-a1-m1-cB 97 78 0.2887 0.2887 0.3590 1.70e-10 2jsc-a1-m1-cA_2jsc-a1-m1-cB
11 4omz-a2-m1-cC 100 73 0.2680 0.2600 0.3562 6.34e-10 4omz-a2-m1-cD_4omz-a2-m1-cC
12 4omz-a2-m1-cD 98 73 0.2680 0.2653 0.3562 6.55e-10 4omz-a2-m1-cD_4omz-a2-m1-cC
13 3jth-a1-m1-cA 92 76 0.2990 0.3152 0.3816 1.62e-09 3jth-a1-m1-cB_3jth-a1-m1-cA
14 3jth-a1-m1-cB 88 76 0.2990 0.3295 0.3816 1.80e-09 3jth-a1-m1-cB_3jth-a1-m1-cA
15 3cuo-a2-m1-cD 94 74 0.2887 0.2979 0.3784 2.41e-08 3cuo-a2-m1-cD_3cuo-a2-m1-cC
16 3cuo-a2-m1-cC 95 74 0.2887 0.2947 0.3784 2.52e-08 3cuo-a2-m1-cD_3cuo-a2-m1-cC
17 2oqg-a1-m1-cD 105 66 0.2577 0.2381 0.3788 6.33e-08 2oqg-a1-m1-cC_2oqg-a1-m1-cD, 2oqg-a1-m1-cD_2oqg-a1-m1-cA, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
18 2oqg-a1-m1-cC 105 66 0.2577 0.2381 0.3788 6.33e-08 2oqg-a1-m1-cC_2oqg-a1-m1-cD
19 2oqg-a1-m1-cB 107 66 0.2577 0.2336 0.3788 6.59e-08 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
20 2oqg-a1-m1-cA 107 66 0.2577 0.2336 0.3788 8.42e-08 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cA
21 6jmi-a1-m1-cA 100 81 0.3093 0.3000 0.3704 1.32e-07 6jmi-a1-m1-cD_6jmi-a1-m1-cA
22 2kjb-a1-m1-cB 95 69 0.2268 0.2316 0.3188 1.70e-07 2kjb-a1-m1-cA_2kjb-a1-m1-cB
23 2kjb-a1-m1-cA 95 69 0.2268 0.2316 0.3188 1.70e-07 2kjb-a1-m1-cA_2kjb-a1-m1-cB
24 1r1v-a3-m2-cA 95 69 0.2268 0.2316 0.3188 1.70e-07 1r1v-a3-m2-cA_1r1v-a3-m2-cB
25 1r1v-a3-m2-cB 96 74 0.2268 0.2292 0.2973 1.81e-07 1r1v-a3-m2-cA_1r1v-a3-m2-cB
26 6cdb-a3-m4-cB 95 69 0.2268 0.2316 0.3188 2.82e-07 6cdb-a3-m2-cB_6cdb-a3-m4-cB, 6cdb-a3-m4-cB_6cdb-a3-m3-cA
27 6cdb-a3-m2-cB 95 69 0.2268 0.2316 0.3188 2.82e-07 6cdb-a3-m2-cB_6cdb-a3-m4-cB
28 6cdb-a3-m3-cA 97 74 0.2268 0.2268 0.2973 3.13e-07 6cdb-a3-m4-cB_6cdb-a3-m3-cA
29 2lkp-a1-m1-cB 119 76 0.2784 0.2269 0.3553 8.68e-07 2lkp-a1-m1-cA_2lkp-a1-m1-cB
30 2lkp-a1-m1-cA 119 76 0.2784 0.2269 0.3553 8.68e-07 2lkp-a1-m1-cA_2lkp-a1-m1-cB
31 3f6o-a2-m2-cA 97 50 0.1959 0.1959 0.3800 3.08e-06 3f6o-a2-m1-cA_3f6o-a2-m2-cA
32 3f6o-a2-m1-cA 97 50 0.1959 0.1959 0.3800 3.08e-06 3f6o-a2-m1-cA_3f6o-a2-m2-cA
33 3f6o-a1-m1-cA 97 50 0.1959 0.1959 0.3800 3.08e-06 3f6o-a1-m1-cB_3f6o-a1-m1-cA
34 3f6o-a1-m1-cB 91 50 0.1959 0.2088 0.3800 3.40e-06 3f6o-a1-m1-cB_3f6o-a1-m1-cA
35 6o8l-a1-m2-cA 92 81 0.2577 0.2717 0.3086 2.57e-05 6o8l-a1-m1-cA_6o8l-a1-m2-cA
36 6o8l-a1-m1-cA 92 81 0.2577 0.2717 0.3086 2.57e-05 6o8l-a1-m1-cA_6o8l-a1-m2-cA
37 6j0e-a1-m1-cB 125 79 0.2165 0.1680 0.2658 0.001 6j0e-a1-m1-cA_6j0e-a1-m1-cB
38 6j0e-a1-m1-cA 124 79 0.2165 0.1694 0.2658 0.001 6j0e-a1-m1-cA_6j0e-a1-m1-cB
39 1r23-a1-m1-cB 97 71 0.2165 0.2165 0.2958 0.004 1r23-a1-m1-cB_1r23-a1-m1-cA
40 3gw2-a1-m2-cA 92 75 0.2887 0.3043 0.3733 0.006 3gw2-a1-m1-cA_3gw2-a1-m2-cA
41 3gw2-a1-m1-cA 92 75 0.2887 0.3043 0.3733 0.006 3gw2-a1-m1-cA_3gw2-a1-m2-cA
42 1r23-a1-m1-cA 104 71 0.2165 0.2019 0.2958 0.006 1r23-a1-m1-cB_1r23-a1-m1-cA
43 7txn-a1-m1-cB 105 78 0.2371 0.2190 0.2949 0.054 7txn-a1-m1-cA_7txn-a1-m1-cB
44 7txn-a1-m1-cA 104 78 0.2371 0.2212 0.2949 0.059 7txn-a1-m1-cA_7txn-a1-m1-cB
45 6j05-a1-m1-cB 90 85 0.3093 0.3333 0.3529 0.061 6j05-a1-m1-cB_6j05-a1-m1-cA
46 3f72-a2-m1-cC 103 67 0.2371 0.2233 0.3433 0.068 3f72-a2-m1-cD_3f72-a2-m1-cC
47 6j05-a1-m1-cA 101 86 0.3093 0.2970 0.3488 0.13 6j05-a1-m1-cB_6j05-a1-m1-cA
48 2f4n-a2-m2-cB 235 58 0.1856 0.0766 0.3103 0.53 2f4n-a2-m2-cB_2f4n-a2-m2-cC
49 2f4n-a2-m1-cB 235 58 0.1856 0.0766 0.3103 0.53 2f4n-a2-m1-cB_2f4n-a2-m2-cC
50 6jmi-a1-m1-cD 83 54 0.1959 0.2289 0.3519 0.66 6jmi-a1-m1-cD_6jmi-a1-m1-cA
51 2h09-a1-m2-cA 127 59 0.1649 0.1260 0.2712 1.9 2h09-a1-m1-cA_2h09-a1-m2-cA
52 2h09-a1-m1-cA 127 59 0.1649 0.1260 0.2712 1.9 2h09-a1-m1-cA_2h09-a1-m2-cA
53 2cg4-a1-m4-cB 149 75 0.2268 0.1477 0.2933 3.4 2cg4-a1-m3-cA_2cg4-a1-m4-cB, 2cg4-a1-m3-cB_2cg4-a1-m4-cB, 2cg4-a1-m4-cA_2cg4-a1-m4-cB
54 2cg4-a1-m4-cA 149 75 0.2268 0.1477 0.2933 3.4 2cg4-a1-m4-cA_2cg4-a1-m4-cB
55 2cg4-a1-m3-cB 149 75 0.2268 0.1477 0.2933 3.4 2cg4-a1-m3-cB_2cg4-a1-m4-cB
56 2cg4-a1-m3-cA 149 75 0.2268 0.1477 0.2933 3.4 2cg4-a1-m3-cA_2cg4-a1-m4-cB
57 7ezx-a1-m1-cdD 297 53 0.1753 0.0572 0.3208 5.1 7ezx-a1-m1-cd4_7ezx-a1-m1-cdD
58 7ezx-a1-m1-cd4 297 53 0.1753 0.0572 0.3208 5.1 7ezx-a1-m1-cd4_7ezx-a1-m1-cdD

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Reference:
Jacob Schwartz et al.

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