Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
PAFVCPAADIKTTKCLGPKDCLYPSPKTCNGYIQCSPADDSYLTGIIHEMPCPSGLLWND
NKKWCDWPENTTCG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4z4a-a1-m1-cA 74 74 1.0000 1.0000 1.0000 1.26e-50 4z4a-a1-m1-cA_4z4a-a1-m1-cB
2 4z4a-a1-m1-cB 75 73 0.9865 0.9733 1.0000 4.15e-50 4z4a-a1-m1-cA_4z4a-a1-m1-cB
3 5hbf-a3-m1-cA 424 58 0.2297 0.0401 0.2931 7.62e-05 5hbf-a3-m1-cA_5hbf-a3-m1-cB
4 5hbf-a3-m1-cB 425 53 0.2162 0.0376 0.3019 1.98e-04 5hbf-a3-m1-cA_5hbf-a3-m1-cB
5 6xeq-a1-m1-cD 315 23 0.0946 0.0222 0.3043 5.3 6xeq-a1-m1-cD_6xeq-a1-m1-cA, 6xeq-a1-m1-cD_6xeq-a1-m1-cB, 6xeq-a1-m1-cD_6xeq-a1-m1-cC
6 6xeq-a1-m1-cC 318 23 0.0946 0.0220 0.3043 5.3 6xeq-a1-m1-cD_6xeq-a1-m1-cC
7 6xeq-a1-m1-cB 318 23 0.0946 0.0220 0.3043 5.3 6xeq-a1-m1-cD_6xeq-a1-m1-cB
8 6xeq-a1-m1-cA 320 23 0.0946 0.0219 0.3043 5.3 6xeq-a1-m1-cD_6xeq-a1-m1-cA
9 6vpb-a1-m2-cA 320 23 0.0946 0.0219 0.3043 5.7 6vpb-a1-m2-cA_6vpb-a1-m2-cB
10 6vpb-a1-m1-cA 320 23 0.0946 0.0219 0.3043 5.7 6vpb-a1-m1-cA_6vpb-a1-m2-cB
11 6vpb-a1-m2-cB 324 23 0.0946 0.0216 0.3043 5.7 6vpb-a1-m1-cA_6vpb-a1-m2-cB, 6vpb-a1-m1-cB_6vpb-a1-m2-cB, 6vpb-a1-m2-cA_6vpb-a1-m2-cB
12 6vpb-a1-m1-cB 324 23 0.0946 0.0216 0.3043 5.7 6vpb-a1-m1-cB_6vpb-a1-m2-cB
13 2wds-a1-m3-cA 123 15 0.0946 0.0569 0.4667 6.1 2wds-a1-m2-cA_2wds-a1-m3-cA
14 2wds-a1-m2-cA 123 15 0.0946 0.0569 0.4667 6.1 2wds-a1-m2-cA_2wds-a1-m3-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600