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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
PANKLVIVTEKILLKKIAKIIDESGAKGYTVMNTANIKFEILTETREMAEEIADRVAVKY
FNDYAGIIYICSAEVLYGHTFCGPEGC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6wue-a1-m1-cB 87 87 1.0000 1.0000 1.0000 1.02e-59 6wue-a1-m1-cB_6wue-a1-m2-cA
2 6wue-a1-m2-cA 90 88 1.0000 0.9667 0.9886 6.20e-58 6wue-a1-m1-cB_6wue-a1-m2-cA
3 7egl-a1-m3-cB 93 91 1.0000 0.9355 0.9560 2.54e-57 7egl-a1-m2-cB_7egl-a1-m3-cB
4 7egl-a1-m2-cB 93 91 1.0000 0.9355 0.9560 2.54e-57 7egl-a1-m2-cB_7egl-a1-m3-cB
5 7r31-a1-m1-cB 100 99 0.9080 0.7900 0.7980 1.72e-47 7r31-a1-m1-cA_7r31-a1-m1-cB
6 7r31-a1-m1-cA 99 98 0.8966 0.7879 0.7959 3.73e-46 7r31-a1-m1-cA_7r31-a1-m1-cB
7 3dfe-a2-m1-cB 81 79 0.6782 0.7284 0.7468 2.11e-35 3dfe-a2-m1-cA_3dfe-a2-m1-cB
8 3dfe-a2-m1-cA 81 79 0.6782 0.7284 0.7468 2.11e-35 3dfe-a2-m1-cA_3dfe-a2-m1-cB
9 6mm2-a1-m3-cA 99 93 0.5172 0.4545 0.4839 2.83e-23 6mm2-a1-m2-cA_6mm2-a1-m3-cA
10 6mm2-a1-m2-cA 99 93 0.5172 0.4545 0.4839 2.83e-23 6mm2-a1-m2-cA_6mm2-a1-m3-cA
11 2cz4-a2-m2-cC 91 89 0.3103 0.2967 0.3034 1.84e-06 2cz4-a2-m2-cC_2cz4-a2-m1-cB, 2cz4-a2-m2-cC_2cz4-a2-m2-cB
12 2cz4-a2-m2-cB 92 90 0.3103 0.2935 0.3000 2.09e-06 2cz4-a2-m2-cC_2cz4-a2-m2-cB
13 2cz4-a2-m1-cB 92 90 0.3103 0.2935 0.3000 2.09e-06 2cz4-a2-m2-cC_2cz4-a2-m1-cB
14 3dls-a8-m2-cE 282 27 0.1379 0.0426 0.4444 0.82 3dls-a8-m3-cF_3dls-a8-m2-cE
15 3dls-a8-m3-cF 281 27 0.1379 0.0427 0.4444 0.84 3dls-a8-m3-cF_3dls-a8-m2-cE
16 4a7k-a1-m2-cA 879 19 0.1379 0.0137 0.6316 0.97 4a7k-a1-m1-cA_4a7k-a1-m2-cA
17 4a7k-a1-m1-cA 879 19 0.1379 0.0137 0.6316 0.97 4a7k-a1-m1-cA_4a7k-a1-m2-cA
18 3nek-a1-m1-cA 215 64 0.2529 0.1023 0.3438 6.8 3nek-a1-m1-cA_3nek-a1-m1-cB
19 3nek-a1-m1-cB 216 64 0.2529 0.1019 0.3438 7.4 3nek-a1-m1-cA_3nek-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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