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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
PAPLEQRLTEQALEQAKAVGATDDVAELKLAQDKYAAAQIATAESYKKARLLAEQAELDA
RLAESKVLTQKSKDQLGELDKSLKRLRKQLGETD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4fm3-a1-m1-cD 94 94 1.0000 1.0000 1.0000 4.89e-59 4fm3-a1-m1-cC_4fm3-a1-m1-cD
2 4fm3-a1-m1-cC 94 94 1.0000 1.0000 1.0000 4.89e-59 4fm3-a1-m1-cC_4fm3-a1-m1-cD
3 2y0t-a1-m2-cA 52 27 0.1277 0.2308 0.4444 1.6 2y0t-a1-m1-cA_2y0t-a1-m2-cA, 2y0t-a1-m2-cB_2y0t-a1-m2-cA
4 2y0t-a1-m1-cA 52 27 0.1277 0.2308 0.4444 1.6 2y0t-a1-m1-cA_2y0t-a1-m2-cA
5 2y0t-a1-m2-cB 49 27 0.1277 0.2449 0.4444 2.0 2y0t-a1-m2-cB_2y0t-a1-m2-cA
6 4cq4-a1-m1-cA 106 27 0.1277 0.1132 0.4444 2.7 4cq4-a1-m1-cD_4cq4-a1-m1-cA
7 3zx6-a1-m1-cB 303 30 0.1383 0.0429 0.4333 2.9 3zx6-a1-m1-cA_3zx6-a1-m1-cB
8 3zx6-a1-m1-cA 303 30 0.1383 0.0429 0.4333 3.0 3zx6-a1-m1-cA_3zx6-a1-m1-cB
9 4cq4-a1-m1-cD 102 27 0.1277 0.1176 0.4444 3.5 4cq4-a1-m1-cB_4cq4-a1-m1-cD, 4cq4-a1-m1-cC_4cq4-a1-m1-cD, 4cq4-a1-m1-cD_4cq4-a1-m1-cA
10 4cq4-a1-m1-cC 102 27 0.1277 0.1176 0.4444 3.5 4cq4-a1-m1-cC_4cq4-a1-m1-cD
11 4cq4-a1-m1-cB 102 27 0.1277 0.1176 0.4444 3.5 4cq4-a1-m1-cB_4cq4-a1-m1-cD
12 3zcc-a1-m1-cB 110 27 0.1277 0.1091 0.4444 4.3 3zcc-a1-m1-cA_3zcc-a1-m1-cB
13 3zcc-a1-m1-cA 110 27 0.1277 0.1091 0.4444 4.3 3zcc-a1-m1-cA_3zcc-a1-m1-cB
14 3zrw-a1-m1-cB 110 27 0.1277 0.1091 0.4444 4.7 3zrw-a1-m1-cB_3zrw-a1-m1-cA
15 2lfr-a1-m1-cB 111 27 0.1277 0.1081 0.4444 4.9 2lfr-a1-m1-cA_2lfr-a1-m1-cB
16 2lfr-a1-m1-cA 111 27 0.1277 0.1081 0.4444 4.9 2lfr-a1-m1-cA_2lfr-a1-m1-cB
17 3zrw-a1-m1-cA 111 27 0.1277 0.1081 0.4444 5.2 3zrw-a1-m1-cB_3zrw-a1-m1-cA
18 2lfs-a1-m1-cB 111 27 0.1277 0.1081 0.4444 5.2 2lfs-a1-m1-cA_2lfs-a1-m1-cB
19 2lfs-a1-m1-cA 111 27 0.1277 0.1081 0.4444 5.2 2lfs-a1-m1-cA_2lfs-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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