Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=42)
PAPPAIADLLASVDSEEVRDYCRTKGWIVQEKITKESLERNV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6q68-a1-m1-cD 42 42 1.0000 1.0000 1.0000 1.64e-25 6q68-a1-m1-cB_6q68-a1-m1-cD
2 6q68-a1-m1-cB 42 42 1.0000 1.0000 1.0000 1.64e-25 6q68-a1-m1-cB_6q68-a1-m1-cD
3 6q69-a1-m1-cD 43 42 0.7619 0.7442 0.7619 1.40e-18 6q69-a1-m1-cB_6q69-a1-m1-cD
4 6q69-a1-m1-cB 43 42 0.7619 0.7442 0.7619 1.40e-18 6q69-a1-m1-cB_6q69-a1-m1-cD
5 1ng7-a1-m1-cB 60 43 0.5952 0.4167 0.5814 8.64e-10 1ng7-a1-m1-cA_1ng7-a1-m1-cB
6 1ng7-a1-m1-cA 60 43 0.5952 0.4167 0.5814 8.64e-10 1ng7-a1-m1-cA_1ng7-a1-m1-cB
7 2gqr-a1-m1-cB 228 37 0.2619 0.0482 0.2973 0.89 2gqr-a1-m1-cA_2gqr-a1-m1-cB
8 2gqr-a1-m1-cA 228 37 0.2619 0.0482 0.2973 0.89 2gqr-a1-m1-cA_2gqr-a1-m1-cB
9 6jp9-a2-m1-cC 274 42 0.3095 0.0474 0.3095 2.2 6jp9-a2-m1-cC_6jp9-a2-m1-cD
10 6jp9-a2-m1-cD 298 42 0.3095 0.0436 0.3095 2.3 6jp9-a2-m1-cC_6jp9-a2-m1-cD
11 4kun-a1-m1-cB 88 30 0.3333 0.1591 0.4667 5.0 4kun-a1-m1-cB_4kun-a1-m1-cA
12 4kun-a1-m1-cA 89 30 0.3333 0.1573 0.4667 5.2 4kun-a1-m1-cB_4kun-a1-m1-cA
13 6kko-a1-m1-cB 164 41 0.2857 0.0732 0.2927 5.4 6kko-a1-m1-cB_6kko-a1-m1-cA
14 6kko-a1-m1-cA 167 41 0.2857 0.0719 0.2927 5.9 6kko-a1-m1-cB_6kko-a1-m1-cA
15 4s3p-a6-m2-cA 691 19 0.2143 0.0130 0.4737 6.2 4s3p-a6-m2-cB_4s3p-a6-m2-cA
16 4s3p-a6-m1-cA 691 19 0.2143 0.0130 0.4737 6.2 4s3p-a6-m2-cB_4s3p-a6-m1-cA
17 4s3p-a6-m2-cB 689 19 0.2143 0.0131 0.4737 6.3 4s3p-a6-m1-cB_4s3p-a6-m2-cB, 4s3p-a6-m2-cB_4s3p-a6-m1-cA, 4s3p-a6-m2-cB_4s3p-a6-m2-cA
18 4s3p-a6-m1-cB 689 19 0.2143 0.0131 0.4737 6.3 4s3p-a6-m1-cB_4s3p-a6-m2-cB
19 2p2u-a1-m2-cA 144 18 0.2619 0.0764 0.6111 7.3 2p2u-a1-m1-cA_2p2u-a1-m2-cA
20 2p2u-a1-m1-cA 144 18 0.2619 0.0764 0.6111 7.3 2p2u-a1-m1-cA_2p2u-a1-m2-cA
21 2p2u-a2-m3-cB 147 18 0.2619 0.0748 0.6111 7.4 2p2u-a2-m1-cB_2p2u-a2-m3-cB
22 2p2u-a2-m1-cB 147 18 0.2619 0.0748 0.6111 7.4 2p2u-a2-m1-cB_2p2u-a2-m3-cB
23 1e19-a1-m1-cB 313 18 0.2143 0.0288 0.5000 7.6 1e19-a1-m1-cA_1e19-a1-m1-cB
24 1e19-a1-m1-cA 313 18 0.2143 0.0288 0.5000 7.6 1e19-a1-m1-cA_1e19-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600