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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
PATVAELQAEIAAWIHPLNPDRRPGGTIAKLLEEIGELIASDPLEVADVLILALDLATLL
GVDVTEAIRAKLAINRARSWARADNGAMRHIP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7ody-a1-m1-cD 92 92 1.0000 1.0000 1.0000 6.55e-60 7ody-a1-m1-cD_7ody-a1-m1-cA, 7ody-a1-m1-cD_7ody-a1-m1-cB, 7ody-a1-m1-cD_7ody-a1-m1-cC
2 7ody-a1-m1-cB 94 94 1.0000 0.9787 0.9787 6.21e-58 7ody-a1-m1-cD_7ody-a1-m1-cB
3 7ody-a1-m1-cA 99 94 1.0000 0.9293 0.9787 9.64e-58 7ody-a1-m1-cD_7ody-a1-m1-cA
4 7ody-a1-m1-cC 100 96 1.0000 0.9200 0.9583 9.73e-58 7ody-a1-m1-cD_7ody-a1-m1-cC
5 1vmg-a2-m4-cA 80 69 0.2391 0.2750 0.3188 0.011 1vmg-a2-m1-cA_1vmg-a2-m4-cA, 1vmg-a2-m2-cA_1vmg-a2-m4-cA, 1vmg-a2-m3-cA_1vmg-a2-m4-cA
6 1vmg-a2-m3-cA 80 69 0.2391 0.2750 0.3188 0.011 1vmg-a2-m3-cA_1vmg-a2-m4-cA
7 1vmg-a2-m2-cA 80 69 0.2391 0.2750 0.3188 0.011 1vmg-a2-m2-cA_1vmg-a2-m4-cA
8 1vmg-a2-m1-cA 80 69 0.2391 0.2750 0.3188 0.011 1vmg-a2-m1-cA_1vmg-a2-m4-cA
9 2q5z-a1-m2-cA 93 92 0.2717 0.2688 0.2717 0.41 2q5z-a1-m2-cA_2q5z-a1-m2-cB
10 2q5z-a1-m2-cB 94 92 0.2717 0.2660 0.2717 0.42 2q5z-a1-m2-cA_2q5z-a1-m2-cB
11 2q9l-a1-m1-cB 90 90 0.2717 0.2778 0.2778 0.75 2q9l-a1-m1-cD_2q9l-a1-m1-cB
12 7mu5-a2-m1-cH 104 34 0.1630 0.1442 0.4412 0.77 7mu5-a2-m1-cH_7mu5-a2-m1-cB, 7mu5-a2-m1-cH_7mu5-a2-m1-cF
13 7mu5-a1-m1-cA 110 34 0.1630 0.1364 0.4412 0.77 7mu5-a1-m1-cG_7mu5-a1-m1-cA
14 7mu5-a2-m1-cB 105 34 0.1630 0.1429 0.4412 0.79 7mu5-a2-m1-cH_7mu5-a2-m1-cB
15 7mu5-a2-m1-cF 106 34 0.1630 0.1415 0.4412 0.85 7mu5-a2-m1-cH_7mu5-a2-m1-cF
16 7mu5-a1-m1-cG 104 34 0.1630 0.1442 0.4412 0.94 7mu5-a1-m1-cG_7mu5-a1-m1-cA
17 3jwp-a1-m3-cA 252 59 0.1848 0.0675 0.2881 2.1 3jwp-a1-m2-cA_3jwp-a1-m3-cA
18 3jwp-a1-m2-cA 252 59 0.1848 0.0675 0.2881 2.1 3jwp-a1-m2-cA_3jwp-a1-m3-cA
19 7d3y-a1-m1-cB 337 62 0.2283 0.0623 0.3387 4.3 7d3y-a1-m1-cB_7d3y-a1-m1-cA
20 7d3y-a1-m1-cA 341 62 0.2283 0.0616 0.3387 4.3 7d3y-a1-m1-cB_7d3y-a1-m1-cA
21 2q9l-a1-m1-cD 78 66 0.2174 0.2564 0.3030 5.0 2q9l-a1-m1-cD_2q9l-a1-m1-cB
22 6pqh-a2-m1-cC 471 56 0.2065 0.0403 0.3393 5.9 6pqh-a2-m1-cC_6pqh-a2-m1-cD
23 6pqh-a2-m1-cD 477 56 0.2065 0.0398 0.3393 5.9 6pqh-a2-m1-cC_6pqh-a2-m1-cD
24 7t15-a1-m3-cA 215 50 0.1848 0.0791 0.3400 6.0 7t15-a1-m3-cB_7t15-a1-m3-cA
25 5t5k-a1-m1-cF 67 21 0.1196 0.1642 0.5238 6.8 5t5k-a1-m1-cD_5t5k-a1-m1-cF, 5t5k-a1-m1-cE_5t5k-a1-m1-cF
26 5t5k-a1-m1-cE 67 21 0.1196 0.1642 0.5238 6.8 5t5k-a1-m1-cE_5t5k-a1-m1-cF
27 5t5k-a1-m1-cD 67 21 0.1196 0.1642 0.5238 6.8 5t5k-a1-m1-cD_5t5k-a1-m1-cF
28 1b67-a1-m1-cA 68 20 0.1196 0.1618 0.5500 8.4 1b67-a1-m1-cB_1b67-a1-m1-cA
29 1b67-a1-m1-cB 65 20 0.1196 0.1692 0.5500 8.5 1b67-a1-m1-cB_1b67-a1-m1-cA
30 6nu8-a1-m2-cA 488 39 0.1848 0.0348 0.4359 9.2 6nu8-a1-m1-cA_6nu8-a1-m2-cA
31 6nu8-a1-m1-cA 488 39 0.1848 0.0348 0.4359 9.2 6nu8-a1-m1-cA_6nu8-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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