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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
PATVAELQAEIAAWIHPLNPDRRPGGTIAKLLEEIGELIASDRDPLEVADVLILALDLAT
LLGVDVTEAIRAKLAINRARSWARADNGAMRHIP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7ody-a1-m1-cB 94 94 1.0000 1.0000 1.0000 1.93e-61 7ody-a1-m1-cD_7ody-a1-m1-cB
2 7ody-a1-m1-cA 99 94 1.0000 0.9495 1.0000 2.00e-61 7ody-a1-m1-cD_7ody-a1-m1-cA
3 7ody-a1-m1-cC 100 96 1.0000 0.9400 0.9792 1.12e-59 7ody-a1-m1-cD_7ody-a1-m1-cC
4 7ody-a1-m1-cD 92 94 0.9787 1.0000 0.9787 6.34e-58 7ody-a1-m1-cD_7ody-a1-m1-cA, 7ody-a1-m1-cD_7ody-a1-m1-cB, 7ody-a1-m1-cD_7ody-a1-m1-cC
5 1vmg-a2-m4-cA 80 69 0.2234 0.2625 0.3043 0.003 1vmg-a2-m1-cA_1vmg-a2-m4-cA, 1vmg-a2-m2-cA_1vmg-a2-m4-cA, 1vmg-a2-m3-cA_1vmg-a2-m4-cA
6 1vmg-a2-m3-cA 80 69 0.2234 0.2625 0.3043 0.003 1vmg-a2-m3-cA_1vmg-a2-m4-cA
7 1vmg-a2-m2-cA 80 69 0.2234 0.2625 0.3043 0.003 1vmg-a2-m2-cA_1vmg-a2-m4-cA
8 1vmg-a2-m1-cA 80 69 0.2234 0.2625 0.3043 0.003 1vmg-a2-m1-cA_1vmg-a2-m4-cA
9 2q5z-a1-m2-cA 93 92 0.2766 0.2796 0.2826 0.11 2q5z-a1-m2-cA_2q5z-a1-m2-cB
10 2q5z-a1-m2-cB 94 92 0.2766 0.2766 0.2826 0.13 2q5z-a1-m2-cA_2q5z-a1-m2-cB
11 2q9l-a1-m1-cB 90 90 0.2766 0.2889 0.2889 0.24 2q9l-a1-m1-cD_2q9l-a1-m1-cB
12 7mu5-a2-m1-cH 104 34 0.1596 0.1442 0.4412 0.86 7mu5-a2-m1-cH_7mu5-a2-m1-cB, 7mu5-a2-m1-cH_7mu5-a2-m1-cF
13 7mu5-a1-m1-cA 110 34 0.1596 0.1364 0.4412 0.89 7mu5-a1-m1-cG_7mu5-a1-m1-cA
14 7mu5-a2-m1-cB 105 34 0.1596 0.1429 0.4412 0.89 7mu5-a2-m1-cH_7mu5-a2-m1-cB
15 7mu5-a2-m1-cF 106 34 0.1596 0.1415 0.4412 0.94 7mu5-a2-m1-cH_7mu5-a2-m1-cF
16 7mu5-a1-m1-cG 104 34 0.1596 0.1442 0.4412 1.0 7mu5-a1-m1-cG_7mu5-a1-m1-cA
17 2q9l-a1-m1-cD 78 66 0.2234 0.2692 0.3182 1.5 2q9l-a1-m1-cD_2q9l-a1-m1-cB
18 6zyd-a1-m1-cG 323 48 0.1596 0.0464 0.3125 3.2 6zyd-a1-m1-cF_6zyd-a1-m1-cG
19 6zyd-a1-m1-cF 323 48 0.1596 0.0464 0.3125 3.2 6zyd-a1-m1-cF_6zyd-a1-m1-cG
20 7d3y-a1-m1-cB 337 62 0.2234 0.0623 0.3387 3.6 7d3y-a1-m1-cB_7d3y-a1-m1-cA
21 7d3y-a1-m1-cA 341 62 0.2234 0.0616 0.3387 3.6 7d3y-a1-m1-cB_7d3y-a1-m1-cA
22 6pqh-a2-m1-cC 471 58 0.2128 0.0425 0.3448 6.1 6pqh-a2-m1-cC_6pqh-a2-m1-cD
23 6pqh-a2-m1-cD 477 58 0.2128 0.0419 0.3448 6.1 6pqh-a2-m1-cC_6pqh-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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