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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
PDAEERQTKLRLAYALNAVIDRARLSQAAAAARLGINQPKVSALRNYKLEGFSVERLTLL
NALDQDVEIVIRKKPRSRAAARISVVAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2o38-a1-m1-cB 88 88 1.0000 1.0000 1.0000 9.57e-57 2o38-a1-m1-cA_2o38-a1-m1-cB
2 2o38-a1-m1-cA 88 88 1.0000 1.0000 1.0000 9.57e-57 2o38-a1-m1-cA_2o38-a1-m1-cB
3 2a6c-a3-m3-cB 72 62 0.2614 0.3194 0.3710 3.86e-04 2a6c-a3-m1-cB_2a6c-a3-m3-cB
4 2a6c-a3-m1-cB 72 62 0.2614 0.3194 0.3710 3.86e-04 2a6c-a3-m1-cB_2a6c-a3-m3-cB
5 5xem-a1-m1-cB 301 73 0.2386 0.0698 0.2877 0.13 5xem-a1-m1-cB_5xem-a1-m1-cA
6 5xem-a1-m1-cA 302 73 0.2386 0.0695 0.2877 0.14 5xem-a1-m1-cB_5xem-a1-m1-cA
7 6liv-a2-m1-cD 482 48 0.1477 0.0270 0.2708 5.3 6liv-a2-m1-cD_6liv-a2-m1-cC
8 6liv-a2-m1-cC 484 48 0.1477 0.0269 0.2708 5.3 6liv-a2-m1-cD_6liv-a2-m1-cC
9 5afr-a1-m1-cB 325 30 0.0909 0.0246 0.2667 7.8 5afr-a1-m1-cB_5afr-a1-m1-cA
10 4gcz-a1-m1-cB 368 47 0.1932 0.0462 0.3617 8.0 4gcz-a1-m1-cA_4gcz-a1-m1-cB
11 5afr-a1-m1-cA 327 30 0.0909 0.0245 0.2667 8.2 5afr-a1-m1-cB_5afr-a1-m1-cA
12 2ef8-a1-m1-cB 82 38 0.1364 0.1463 0.3158 8.6 2ef8-a1-m1-cB_2ef8-a1-m1-cA
13 2ef8-a1-m1-cA 83 38 0.1364 0.1446 0.3158 8.6 2ef8-a1-m1-cB_2ef8-a1-m1-cA
14 4gcz-a1-m1-cA 356 47 0.1932 0.0478 0.3617 8.8 4gcz-a1-m1-cA_4gcz-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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