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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
PDARRQAQLRHLLLQDCGSCHGLRLTGGLGPALTPEALRGKPRESLVATVLMGRPQTPMP
PWAGLLSADDAGWLVDRLIEGEIAP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6tp9-a6-m1-cI 85 85 1.0000 1.0000 1.0000 4.72e-56 6tp9-a6-m1-cH_6tp9-a6-m1-cI
2 6tp9-a2-m1-cF 85 85 1.0000 1.0000 1.0000 4.72e-56 6tp9-a2-m1-cB_6tp9-a2-m1-cF
3 6tp9-a2-m1-cB 85 85 1.0000 1.0000 1.0000 4.72e-56 6tp9-a2-m1-cB_6tp9-a2-m1-cF
4 6tp9-a6-m1-cH 79 81 0.9294 1.0000 0.9753 1.03e-49 6tp9-a6-m1-cH_6tp9-a6-m1-cI
5 1dy7-a1-m1-cB 536 76 0.2824 0.0448 0.3158 1.67e-04 1dy7-a1-m1-cA_1dy7-a1-m1-cB
6 7c90-a1-m1-cD 150 86 0.2588 0.1467 0.2558 0.17 7c90-a1-m1-cC_7c90-a1-m1-cD, 7c90-a1-m1-cD_7c90-a1-m1-cA
7 7c90-a1-m1-cA 151 86 0.2588 0.1457 0.2558 0.17 7c90-a1-m1-cD_7c90-a1-m1-cA
8 7c90-a1-m1-cC 145 86 0.2588 0.1517 0.2558 0.19 7c90-a1-m1-cC_7c90-a1-m1-cD
9 6klv-a1-m1-cF 236 18 0.1059 0.0381 0.5000 1.4 6klv-a1-m1-cC_6klv-a1-m1-cF
10 6klv-a1-m1-cC 236 18 0.1059 0.0381 0.5000 1.4 6klv-a1-m1-cC_6klv-a1-m1-cF
11 2d69-a1-m2-cB 418 58 0.2588 0.0526 0.3793 2.9 2d69-a1-m2-cB_2d69-a1-m1-cA
12 2cwx-a2-m1-cA 414 58 0.2588 0.0531 0.3793 3.0 2cwx-a2-m1-cE_2cwx-a2-m1-cA
13 2d69-a1-m1-cA 424 58 0.2588 0.0519 0.3793 3.0 2d69-a1-m2-cB_2d69-a1-m1-cA
14 2cwx-a2-m1-cE 408 58 0.2588 0.0539 0.3793 3.4 2cwx-a2-m1-cE_2cwx-a2-m1-cA
15 2cwx-a1-m4-cE 408 58 0.2588 0.0539 0.3793 3.4 2cwx-a1-m2-cE_2cwx-a1-m4-cE
16 2cwx-a1-m2-cE 408 58 0.2588 0.0539 0.3793 3.4 2cwx-a1-m2-cE_2cwx-a1-m4-cE
17 2pbq-a1-m1-cB 165 40 0.1882 0.0970 0.4000 6.5 2pbq-a1-m1-cB_2pbq-a1-m1-cC
18 2pbq-a1-m1-cC 172 40 0.1882 0.0930 0.4000 6.7 2pbq-a1-m1-cB_2pbq-a1-m1-cC
19 1di6-a1-m3-cA 183 27 0.1647 0.0765 0.5185 9.8 1di6-a1-m2-cA_1di6-a1-m3-cA
20 1di6-a1-m2-cA 183 27 0.1647 0.0765 0.5185 9.8 1di6-a1-m2-cA_1di6-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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