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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
PDFIEALTEKITEEVTAKVTEELTKQNEFFAAVAKQSQDNFDRINKRLEERDEKLSTIRL
IQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7c7y-a1-m1-cD 62 62 1.0000 1.0000 1.0000 2.02e-38 7c7y-a1-m1-cD_7c7y-a1-m1-cB
2 7c7y-a1-m1-cB 64 62 1.0000 0.9688 1.0000 2.13e-38 7c7y-a1-m1-cB_7c7y-a1-m1-cC, 7c7y-a1-m1-cD_7c7y-a1-m1-cB
3 7c7y-a1-m1-cC 65 62 1.0000 0.9538 1.0000 2.24e-38 7c7y-a1-m1-cB_7c7y-a1-m1-cC
4 2wrc-a1-m1-cC 467 48 0.2581 0.0343 0.3333 0.18 2wrc-a1-m1-cC_2wrc-a1-m1-cA
5 2wrc-a1-m1-cA 474 48 0.2581 0.0338 0.3333 0.19 2wrc-a1-m1-cC_2wrc-a1-m1-cA
6 6ntf-a1-m3-cA 491 48 0.2419 0.0305 0.3125 0.51 6ntf-a1-m2-cA_6ntf-a1-m3-cA
7 6ntf-a1-m2-cA 491 48 0.2419 0.0305 0.3125 0.51 6ntf-a1-m2-cA_6ntf-a1-m3-cA
8 3ku5-a1-m3-cB 172 48 0.2581 0.0930 0.3333 2.2 3ku5-a1-m2-cB_3ku5-a1-m3-cB
9 3ku5-a1-m2-cB 172 48 0.2581 0.0930 0.3333 2.2 3ku5-a1-m2-cB_3ku5-a1-m3-cB
10 6nsd-a1-m1-cB 498 16 0.1452 0.0181 0.5625 6.9 6nsd-a1-m1-cB_6nsd-a1-m1-cA
11 6nsd-a1-m1-cA 503 16 0.1452 0.0179 0.5625 6.9 6nsd-a1-m1-cB_6nsd-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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