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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
PDSVSIPITCCFNVINRKIPIQRLESYTRITNIQCPKEAVIFKTQRGKEVCADPKERWVR
DSMKHLDQIFQNLKP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7s5a-a1-m1-cB 76 75 1.0000 0.9868 1.0000 8.82e-52 7s5a-a1-m1-cA_7s5a-a1-m1-cB
2 1esr-a1-m2-cA 75 75 1.0000 1.0000 1.0000 1.06e-51 1esr-a1-m1-cA_1esr-a1-m2-cA
3 1esr-a1-m1-cA 75 75 1.0000 1.0000 1.0000 1.06e-51 1esr-a1-m1-cA_1esr-a1-m2-cA
4 7s5a-a1-m1-cA 73 72 0.9600 0.9863 1.0000 1.78e-49 7s5a-a1-m1-cA_7s5a-a1-m1-cB
5 1ncv-a1-m1-cB 76 74 0.5600 0.5526 0.5676 1.45e-26 1ncv-a1-m1-cA_1ncv-a1-m1-cB
6 1ncv-a1-m1-cA 76 74 0.5600 0.5526 0.5676 1.45e-26 1ncv-a1-m1-cA_1ncv-a1-m1-cB
7 2ra4-a4-m4-cB 65 66 0.4933 0.5692 0.5606 3.36e-24 2ra4-a4-m2-cB_2ra4-a4-m4-cB
8 2ra4-a4-m2-cB 65 66 0.4933 0.5692 0.5606 3.36e-24 2ra4-a4-m2-cB_2ra4-a4-m4-cB
9 2ra4-a2-m4-cB 65 66 0.4933 0.5692 0.5606 3.36e-24 2ra4-a2-m4-cA_2ra4-a2-m4-cB
10 2ra4-a2-m4-cA 65 66 0.4933 0.5692 0.5606 3.36e-24 2ra4-a2-m4-cA_2ra4-a2-m4-cB
11 2q8r-a2-m1-cG 63 60 0.3467 0.4127 0.4333 2.32e-13 2q8r-a2-m1-cF_2q8r-a2-m1-cG
12 2q8r-a2-m1-cF 63 60 0.3467 0.4127 0.4333 2.32e-13 2q8r-a2-m1-cF_2q8r-a2-m1-cG
13 1f2l-a1-m1-cD 70 61 0.3467 0.3714 0.4262 6.62e-11 1f2l-a1-m1-cA_1f2l-a1-m1-cD, 1f2l-a1-m1-cC_1f2l-a1-m1-cD
14 1f2l-a1-m1-cC 64 60 0.3467 0.4062 0.4333 7.31e-11 1f2l-a1-m1-cC_1f2l-a1-m1-cD
15 1f2l-a1-m1-cA 64 60 0.3467 0.4062 0.4333 7.31e-11 1f2l-a1-m1-cA_1f2l-a1-m1-cD
16 2vxw-a1-m1-cB 69 59 0.2800 0.3043 0.3559 7.29e-10 2vxw-a1-m1-cD_2vxw-a1-m1-cB
17 2vxw-a1-m1-cA 69 59 0.2800 0.3043 0.3559 7.29e-10 2vxw-a1-m1-cD_2vxw-a1-m1-cA
18 2vxw-a1-m1-cD 62 59 0.2800 0.3387 0.3559 8.99e-10 2vxw-a1-m1-cD_2vxw-a1-m1-cA, 2vxw-a1-m1-cD_2vxw-a1-m1-cB
19 2l9h-a1-m1-cC 67 58 0.2800 0.3134 0.3621 1.07e-09 2l9h-a1-m1-cA_2l9h-a1-m1-cC
20 2l9h-a1-m1-cA 67 58 0.2800 0.3134 0.3621 1.07e-09 2l9h-a1-m1-cA_2l9h-a1-m1-cC
21 1hrj-a1-m1-cB 68 58 0.2800 0.3088 0.3621 1.08e-09 1hrj-a1-m1-cA_1hrj-a1-m1-cB
22 1hrj-a1-m1-cA 68 58 0.2800 0.3088 0.3621 1.08e-09 1hrj-a1-m1-cA_1hrj-a1-m1-cB
23 5l2u-a2-m2-cI 65 58 0.2800 0.3231 0.3621 1.20e-09 5l2u-a2-m2-cG_5l2u-a2-m2-cI
24 5dnf-a1-m1-cG 65 58 0.2800 0.3231 0.3621 1.20e-09 5dnf-a1-m1-cE_5dnf-a1-m1-cG
25 5dnf-a1-m1-cE 65 58 0.2800 0.3231 0.3621 1.20e-09 5dnf-a1-m1-cE_5dnf-a1-m1-cG
26 5dnf-a1-m1-cD 65 58 0.2800 0.3231 0.3621 1.20e-09 5dnf-a1-m1-cA_5dnf-a1-m1-cD
27 5dnf-a1-m1-cA 65 58 0.2800 0.3231 0.3621 1.20e-09 5dnf-a1-m1-cA_5dnf-a1-m1-cD
28 5l2u-a2-m2-cH 64 58 0.2800 0.3281 0.3621 1.26e-09 5l2u-a2-m2-cG_5l2u-a2-m2-cH
29 5l2u-a2-m2-cG 64 58 0.2800 0.3281 0.3621 1.26e-09 5l2u-a2-m2-cG_5l2u-a2-m2-cH, 5l2u-a2-m2-cG_5l2u-a2-m2-cI
30 4mhe-a2-m1-cC 61 57 0.2933 0.3607 0.3860 1.60e-09 4mhe-a2-m1-cC_4mhe-a2-m1-cB
31 4mhe-a2-m1-cB 69 57 0.2933 0.3188 0.3860 1.78e-09 4mhe-a2-m1-cC_4mhe-a2-m1-cB
32 6aez-a1-m3-cA 64 58 0.2800 0.3281 0.3621 1.87e-09 6aez-a1-m2-cA_6aez-a1-m3-cA
33 6aez-a1-m2-cA 64 58 0.2800 0.3281 0.3621 1.87e-09 6aez-a1-m2-cA_6aez-a1-m3-cA
34 2jp1-a1-m1-cB 60 51 0.3067 0.3833 0.4510 1.95e-09 2jp1-a1-m1-cA_2jp1-a1-m1-cB
35 2jp1-a1-m1-cA 60 51 0.3067 0.3833 0.4510 1.95e-09 2jp1-a1-m1-cA_2jp1-a1-m1-cB
36 5yam-a1-m1-cB 69 58 0.2533 0.2754 0.3276 3.36e-09 5yam-a1-m1-cA_5yam-a1-m1-cB
37 5yam-a1-m1-cA 69 58 0.2533 0.2754 0.3276 3.36e-09 5yam-a1-m1-cA_5yam-a1-m1-cB
38 5eki-a7-m1-cA 72 69 0.3467 0.3611 0.3768 4.01e-09 5eki-a7-m1-cF_5eki-a7-m1-cA
39 5eki-a7-m1-cF 70 69 0.3467 0.3714 0.3768 4.04e-09 5eki-a7-m1-cF_5eki-a7-m1-cA
40 2n54-a1-m1-cB 66 60 0.3067 0.3485 0.3833 4.30e-09 2n54-a1-m1-cA_2n54-a1-m1-cB
41 2n54-a1-m1-cA 66 60 0.3067 0.3485 0.3833 4.30e-09 2n54-a1-m1-cA_2n54-a1-m1-cB
42 2fj2-a2-m1-cC 68 60 0.3067 0.3382 0.3833 1.34e-08 2fj2-a2-m1-cD_2fj2-a2-m1-cC
43 2fj2-a2-m1-cD 67 60 0.3067 0.3433 0.3833 1.35e-08 2fj2-a2-m1-cD_2fj2-a2-m1-cC
44 6log-a1-m2-cA 63 58 0.2667 0.3175 0.3448 1.81e-08 6log-a1-m1-cA_6log-a1-m2-cA
45 6log-a1-m1-cA 63 58 0.2667 0.3175 0.3448 1.81e-08 6log-a1-m1-cA_6log-a1-m2-cA
46 1nr4-a5-m4-cG 66 60 0.2267 0.2576 0.2833 2.68e-08 1nr4-a5-m4-cG_1nr4-a5-m3-cE
47 1nr4-a5-m1-cA 67 60 0.2267 0.2537 0.2833 3.16e-08 1nr4-a5-m1-cA_1nr4-a5-m3-cE
48 1nr4-a5-m3-cE 69 60 0.2267 0.2464 0.2833 3.27e-08 1nr4-a5-m1-cA_1nr4-a5-m3-cE, 1nr4-a5-m3-cF_1nr4-a5-m3-cE, 1nr4-a5-m4-cG_1nr4-a5-m3-cE
49 1nr4-a5-m3-cF 66 60 0.2267 0.2576 0.2833 3.49e-08 1nr4-a5-m3-cF_1nr4-a5-m3-cE
50 5ltl-a1-m1-cB 68 61 0.2800 0.3088 0.3443 3.81e-08 5ltl-a1-m1-cA_5ltl-a1-m1-cB
51 5ltl-a1-m1-cA 67 61 0.2800 0.3134 0.3443 3.89e-08 5ltl-a1-m1-cA_5ltl-a1-m1-cB
52 4oij-a1-m1-cB 71 64 0.3067 0.3239 0.3594 7.49e-08 4oij-a1-m1-cA_4oij-a1-m1-cB
53 4oij-a1-m1-cA 71 64 0.3067 0.3239 0.3594 7.49e-08 4oij-a1-m1-cA_4oij-a1-m1-cB
54 2hci-a1-m1-cB 65 64 0.2667 0.3077 0.3125 2.77e-06 2hci-a1-m1-cB_2hci-a1-m1-cA
55 2hci-a1-m1-cA 68 64 0.2667 0.2941 0.3125 3.22e-06 2hci-a1-m1-cB_2hci-a1-m1-cA
56 1qe6-a3-m2-cA 68 26 0.1600 0.1765 0.4615 0.018 1qe6-a3-m2-cA_1qe6-a3-m2-cB
57 1qe6-a3-m1-cD 72 26 0.1600 0.1667 0.4615 0.021 1qe6-a3-m2-cB_1qe6-a3-m1-cD
58 1qe6-a3-m2-cB 71 26 0.1600 0.1690 0.4615 0.021 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
59 7olf-a1-m1-cB 366 30 0.1333 0.0273 0.3333 0.55 7olf-a1-m1-cB_7olf-a1-m1-cA
60 7olf-a1-m1-cA 372 30 0.1333 0.0269 0.3333 0.55 7olf-a1-m1-cB_7olf-a1-m1-cA
61 2mgs-a1-m1-cB 71 33 0.1333 0.1408 0.3030 0.61 2mgs-a1-m1-cA_2mgs-a1-m1-cB
62 2mgs-a1-m1-cA 71 33 0.1333 0.1408 0.3030 0.61 2mgs-a1-m1-cA_2mgs-a1-m1-cB
63 3hp3-a3-m1-cF 65 59 0.1600 0.1846 0.2034 4.6 3hp3-a3-m1-cD_3hp3-a3-m1-cF
64 3g43-a1-m1-cE 68 25 0.1600 0.1765 0.4800 4.6 3g43-a1-m1-cF_3g43-a1-m1-cE
65 7oh2-a1-m1-cB 359 29 0.1067 0.0223 0.2759 4.7 7oh2-a1-m1-cB_7oh2-a1-m1-cA
66 7oh2-a1-m1-cA 367 29 0.1067 0.0218 0.2759 4.7 7oh2-a1-m1-cB_7oh2-a1-m1-cA
67 3hp3-a3-m1-cD 64 59 0.1600 0.1875 0.2034 4.7 3hp3-a3-m1-cD_3hp3-a3-m1-cF
68 7k5z-a1-m1-cD 388 33 0.1467 0.0284 0.3333 5.0 7k5z-a1-m1-cD_7k5z-a1-m1-cB, 7k5z-a1-m1-cD_7k5z-a1-m1-cC
69 7k5z-a1-m1-cC 390 33 0.1467 0.0282 0.3333 5.0 7k5z-a1-m1-cB_7k5z-a1-m1-cC, 7k5z-a1-m1-cD_7k5z-a1-m1-cC
70 7k5z-a1-m1-cB 390 33 0.1467 0.0282 0.3333 5.0 7k5z-a1-m1-cB_7k5z-a1-m1-cC, 7k5z-a1-m1-cD_7k5z-a1-m1-cB
71 4uai-a1-m1-cB 67 59 0.1600 0.1791 0.2034 5.5 4uai-a1-m1-cB_4uai-a1-m1-cA
72 4uai-a1-m1-cA 68 59 0.1600 0.1765 0.2034 6.3 4uai-a1-m1-cB_4uai-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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