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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
PDYTSFNTVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRVGVTLAGHQKKILN
SIQVMRAQMNQIQS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1b4f-a2-m2-cH 76 74 1.0000 0.9737 1.0000 1.30e-51 1b4f-a2-m1-cE_1b4f-a2-m2-cH
2 1b4f-a2-m1-cF 77 74 1.0000 0.9610 1.0000 1.40e-51 1b4f-a2-m1-cE_1b4f-a2-m1-cF
3 1b4f-a2-m1-cE 74 74 1.0000 1.0000 1.0000 1.48e-51 1b4f-a2-m1-cE_1b4f-a2-m1-cF, 1b4f-a2-m1-cE_1b4f-a2-m2-cH
4 1b0x-a1-m2-cA 72 71 0.4189 0.4306 0.4366 1.56e-19 1b0x-a1-m1-cA_1b0x-a1-m2-cA
5 1b0x-a1-m1-cA 72 71 0.4189 0.4306 0.4366 1.56e-19 1b0x-a1-m1-cA_1b0x-a1-m2-cA
6 5l1m-a1-m2-cA 140 63 0.2568 0.1357 0.3016 2.73e-07 5l1m-a1-m1-cA_5l1m-a1-m2-cA
7 5l1m-a1-m2-cA 140 55 0.2568 0.1357 0.3455 1.90e-05 5l1m-a1-m1-cA_5l1m-a1-m2-cA
8 5l1m-a1-m1-cA 140 63 0.2568 0.1357 0.3016 2.73e-07 5l1m-a1-m1-cA_5l1m-a1-m2-cA
9 5l1m-a1-m1-cA 140 55 0.2568 0.1357 0.3455 1.90e-05 5l1m-a1-m1-cA_5l1m-a1-m2-cA
10 8b10-a1-m1-cC 69 55 0.2162 0.2319 0.2909 4.54e-04 8b10-a1-m1-cA_8b10-a1-m1-cC
11 8b10-a1-m1-cA 69 55 0.2162 0.2319 0.2909 4.54e-04 8b10-a1-m1-cA_8b10-a1-m1-cC, 8b10-a1-m1-cF_8b10-a1-m1-cA
12 8b10-a1-m1-cF 67 55 0.2162 0.2388 0.2909 4.86e-04 8b10-a1-m1-cF_8b10-a1-m1-cA
13 3bq7-a1-m3-cA 68 55 0.2297 0.2500 0.3091 0.003 3bq7-a1-m3-cB_3bq7-a1-m3-cA
14 3bq7-a1-m3-cB 67 55 0.2297 0.2537 0.3091 0.003 3bq7-a1-m3-cB_3bq7-a1-m3-cA
15 2uxq-a1-m1-cB 401 33 0.2027 0.0374 0.4545 3.3 2uxq-a1-m1-cB_2uxq-a1-m1-cA
16 2uxq-a1-m1-cA 402 33 0.2027 0.0373 0.4545 3.4 2uxq-a1-m1-cB_2uxq-a1-m1-cA
17 7ec0-a2-m1-cP 198 32 0.1486 0.0556 0.3438 4.7 7ec0-a2-m1-cP_7ec0-a2-m1-cG
18 1x9x-a1-m1-cB 62 50 0.1757 0.2097 0.2600 6.6 1x9x-a1-m1-cA_1x9x-a1-m1-cB
19 1x9x-a1-m1-cA 62 50 0.1757 0.2097 0.2600 6.6 1x9x-a1-m1-cA_1x9x-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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