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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
PEFMDTCFFCGAVDLSDSSSMRYETLSAKVPSSQKTVSLVLTHLANCIQTQLDLKPGARL
CPRCFQELSDYDTIMVNLMTTQKRLTTQLKLD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7poh-a1-m1-cB 92 92 1.0000 1.0000 1.0000 1.75e-64 7poh-a1-m1-cA_7poh-a1-m1-cB
2 7poh-a1-m1-cA 88 92 0.9457 0.9886 0.9457 1.11e-58 7poh-a1-m1-cA_7poh-a1-m1-cB
3 2pcr-a1-m1-cD 234 55 0.1304 0.0513 0.2182 1.3 2pcr-a1-m1-cA_2pcr-a1-m1-cD, 2pcr-a1-m1-cB_2pcr-a1-m1-cD
4 5f4b-a1-m2-cA 173 24 0.0978 0.0520 0.3750 6.7 5f4b-a1-m2-cB_5f4b-a1-m2-cA
5 5f4b-a1-m1-cA 173 24 0.0978 0.0520 0.3750 6.7 5f4b-a1-m2-cB_5f4b-a1-m1-cA
6 5f4b-a1-m2-cB 172 24 0.0978 0.0523 0.3750 7.0 5f4b-a1-m1-cB_5f4b-a1-m2-cB, 5f4b-a1-m2-cB_5f4b-a1-m1-cA, 5f4b-a1-m2-cB_5f4b-a1-m2-cA
7 5f4b-a1-m1-cB 172 24 0.0978 0.0523 0.3750 7.0 5f4b-a1-m1-cB_5f4b-a1-m2-cB
8 5f51-a2-m4-cA 165 24 0.0978 0.0545 0.3750 7.9 5f51-a2-m1-cA_5f51-a2-m4-cA, 5f51-a2-m3-cA_5f51-a2-m4-cA
9 5f51-a2-m3-cA 165 24 0.0978 0.0545 0.3750 7.9 5f51-a2-m3-cA_5f51-a2-m4-cA
10 5f51-a2-m1-cA 165 24 0.0978 0.0545 0.3750 7.9 5f51-a2-m1-cA_5f51-a2-m4-cA
11 5f51-a1-m6-cA 165 24 0.0978 0.0545 0.3750 7.9 5f51-a1-m1-cA_5f51-a1-m6-cA, 5f51-a1-m2-cA_5f51-a1-m6-cA
12 5f51-a1-m2-cA 165 24 0.0978 0.0545 0.3750 7.9 5f51-a1-m2-cA_5f51-a1-m6-cA
13 5f51-a1-m1-cA 165 24 0.0978 0.0545 0.3750 7.9 5f51-a1-m1-cA_5f51-a1-m6-cA

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Reference:
Jacob Schwartz et al.

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