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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=41)
PEFSAQLGAQHLKDQLEQRTRIEANIHRQQEELRKIQEQLQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5vjx-a4-m2-cS 46 41 1.0000 0.8913 1.0000 1.13e-22 5vjx-a4-m2-cT_5vjx-a4-m2-cS
2 5vjx-a4-m2-cT 41 41 1.0000 1.0000 1.0000 1.19e-22 5vjx-a4-m2-cT_5vjx-a4-m2-cS
3 2j5u-a1-m9-cB 201 31 0.2439 0.0498 0.3226 1.1 2j5u-a1-m10-cB_2j5u-a1-m9-cB, 2j5u-a1-m6-cB_2j5u-a1-m9-cB, 2j5u-a1-m9-cB_2j5u-a1-m9-cA
4 2j5u-a1-m6-cB 201 31 0.2439 0.0498 0.3226 1.1 2j5u-a1-m6-cB_2j5u-a1-m9-cB
5 2j5u-a1-m10-cB 201 31 0.2439 0.0498 0.3226 1.1 2j5u-a1-m10-cB_2j5u-a1-m9-cB
6 2j5u-a1-m9-cA 210 31 0.2439 0.0476 0.3226 1.2 2j5u-a1-m9-cB_2j5u-a1-m9-cA

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Reference:
Jacob Schwartz et al.

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