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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=47)
PEGCEQVLTGKRLQCLPNPEDVKALEVYKLSLEIEQLELQRDSARQS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4b0f-a1-m1-cE 53 47 1.0000 0.8868 1.0000 2.52e-28 4b0f-a1-m1-cC_4b0f-a1-m1-cE
2 4b0f-a1-m1-cC 47 47 1.0000 1.0000 1.0000 3.32e-28 4b0f-a1-m1-cC_4b0f-a1-m1-cE
3 1x0u-a1-m1-cE 518 22 0.2128 0.0193 0.4545 2.5 1x0u-a1-m1-cB_1x0u-a1-m1-cE, 1x0u-a1-m1-cD_1x0u-a1-m1-cE
4 1x0u-a1-m1-cD 518 22 0.2128 0.0193 0.4545 2.5 1x0u-a1-m1-cD_1x0u-a1-m1-cE
5 1x0u-a1-m1-cB 518 22 0.2128 0.0193 0.4545 2.5 1x0u-a1-m1-cB_1x0u-a1-m1-cE
6 1r30-a1-m1-cB 313 35 0.2766 0.0415 0.3714 2.5 1r30-a1-m1-cA_1r30-a1-m1-cB
7 1r30-a1-m1-cA 312 35 0.2766 0.0417 0.3714 2.6 1r30-a1-m1-cA_1r30-a1-m1-cB
8 3mgg-a1-m1-cB 249 46 0.2553 0.0482 0.2609 3.2 3mgg-a1-m1-cA_3mgg-a1-m1-cB
9 1qvr-a2-m2-cA 803 31 0.2766 0.0162 0.4194 5.2 1qvr-a2-m1-cC_1qvr-a2-m2-cA
10 1qvr-a2-m1-cC 803 31 0.2766 0.0162 0.4194 5.2 1qvr-a2-m1-cB_1qvr-a2-m1-cC, 1qvr-a2-m1-cC_1qvr-a2-m2-cA
11 1qvr-a2-m1-cB 803 31 0.2766 0.0162 0.4194 5.2 1qvr-a2-m1-cB_1qvr-a2-m1-cC
12 5jsc-a4-m2-cB 387 22 0.1702 0.0207 0.3636 7.2 5jsc-a4-m2-cB_5jsc-a4-m1-cC
13 5jsc-a5-m1-cD 388 22 0.1702 0.0206 0.3636 7.2 5jsc-a5-m1-cC_5jsc-a5-m1-cD
14 5jsc-a5-m1-cC 388 22 0.1702 0.0206 0.3636 7.2 5jsc-a5-m1-cC_5jsc-a5-m1-cD
15 5jsc-a4-m1-cC 388 22 0.1702 0.0206 0.3636 7.2 5jsc-a4-m2-cB_5jsc-a4-m1-cC
16 5idu-a1-m1-cC 405 22 0.1702 0.0198 0.3636 7.4 5idu-a1-m1-cD_5idu-a1-m1-cC
17 5idu-a1-m1-cD 392 22 0.1702 0.0204 0.3636 7.6 5idu-a1-m1-cA_5idu-a1-m1-cD, 5idu-a1-m1-cD_5idu-a1-m1-cC
18 5idu-a1-m1-cA 392 22 0.1702 0.0204 0.3636 7.6 5idu-a1-m1-cA_5idu-a1-m1-cD
19 3m3i-a4-m1-cG 176 37 0.2553 0.0682 0.3243 9.9 3m3i-a4-m1-cG_3m3i-a4-m1-cD

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Reference:
Jacob Schwartz et al.

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