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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
PEIDTLREEIDRLDAEILALVKRRAEVSKAIGKARMASGGTRLVHSREMKVIERYSELGP
DGKDLAILLLRLGRGRLGH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2w1a-a1-m2-cD 79 79 1.0000 1.0000 1.0000 7.56e-50 2w1a-a1-m1-cD_2w1a-a1-m2-cD
2 2w1a-a1-m1-cD 79 79 1.0000 1.0000 1.0000 7.56e-50 2w1a-a1-m1-cD_2w1a-a1-m2-cD
3 5hud-a1-m1-cH 83 78 0.5823 0.5542 0.5897 3.06e-25 5hud-a1-m1-cG_5hud-a1-m1-cH
4 5hud-a1-m1-cG 83 78 0.5823 0.5542 0.5897 3.06e-25 5hud-a1-m1-cG_5hud-a1-m1-cH
5 1ybz-a2-m2-cA 76 30 0.1899 0.1974 0.5000 1.41e-04 1ybz-a2-m1-cA_1ybz-a2-m2-cA
6 1ybz-a2-m1-cA 76 30 0.1899 0.1974 0.5000 1.41e-04 1ybz-a2-m1-cA_1ybz-a2-m2-cA
7 1ecm-a2-m1-cA 91 54 0.2658 0.2308 0.3889 0.017 1ecm-a2-m1-cA_1ecm-a2-m1-cB
8 1ecm-a2-m1-cB 95 54 0.2658 0.2211 0.3889 0.017 1ecm-a2-m1-cA_1ecm-a2-m1-cB
9 1ecm-a1-m2-cB 95 54 0.2658 0.2211 0.3889 0.017 1ecm-a1-m1-cB_1ecm-a1-m2-cB
10 1ecm-a1-m1-cB 95 54 0.2658 0.2211 0.3889 0.017 1ecm-a1-m1-cB_1ecm-a1-m2-cB
11 2d8d-a1-m1-cA 80 50 0.2025 0.2000 0.3200 0.22 2d8d-a1-m1-cA_2d8d-a1-m1-cB
12 2d8d-a1-m1-cB 83 58 0.2152 0.2048 0.2931 0.24 2d8d-a1-m1-cA_2d8d-a1-m1-cB
13 3tfc-a1-m2-cA 343 31 0.1392 0.0321 0.3548 0.26 3tfc-a1-m1-cA_3tfc-a1-m2-cA, 3tfc-a1-m2-cB_3tfc-a1-m2-cA
14 3tfc-a1-m1-cA 343 31 0.1392 0.0321 0.3548 0.26 3tfc-a1-m1-cA_3tfc-a1-m2-cA, 3tfc-a1-m2-cB_3tfc-a1-m1-cA
15 3oms-a1-m2-cA 124 37 0.1899 0.1210 0.4054 2.8 3oms-a1-m1-cA_3oms-a1-m2-cA
16 3oms-a1-m1-cA 124 37 0.1899 0.1210 0.4054 2.8 3oms-a1-m1-cA_3oms-a1-m2-cA
17 3rmi-a1-m2-cA 105 60 0.2025 0.1524 0.2667 3.3 3rmi-a1-m1-cA_3rmi-a1-m2-cA
18 3rmi-a1-m1-cA 105 60 0.2025 0.1524 0.2667 3.3 3rmi-a1-m1-cA_3rmi-a1-m2-cA
19 7b9s-a1-m1-cV 396 72 0.2405 0.0480 0.2639 3.6 7b9s-a1-m1-cP_7b9s-a1-m1-cV
20 7b9s-a1-m1-cP 396 72 0.2405 0.0480 0.2639 3.6 7b9s-a1-m1-cP_7b9s-a1-m1-cV
21 7dq5-a1-m1-cB 441 58 0.2152 0.0385 0.2931 7.4 7dq5-a1-m1-cB_7dq5-a1-m1-cA
22 7dq5-a1-m1-cA 490 58 0.2152 0.0347 0.2931 8.9 7dq5-a1-m1-cB_7dq5-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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