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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
PELKSSVPQADSAVAAPEKIQLNFSENLTVKFSGAKLTTGKGSSHSPPVAAKVAPGADPK
SVIIPREPLPAGTYRVDWRAVSSDTHPITGNYTFTVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ix2-a1-m1-cA 97 97 1.0000 1.0000 1.0000 7.23e-67 1ix2-a1-m1-cA_1ix2-a1-m1-cB
2 1ix2-a1-m1-cB 98 97 1.0000 0.9898 1.0000 9.09e-67 1ix2-a1-m1-cA_1ix2-a1-m1-cB
3 2c9q-a1-m2-cA 102 101 0.6392 0.6078 0.6139 1.04e-32 2c9q-a1-m1-cA_2c9q-a1-m2-cA
4 2c9q-a1-m1-cA 102 101 0.6392 0.6078 0.6139 1.04e-32 2c9q-a1-m1-cA_2c9q-a1-m2-cA
5 5n1t-a1-m1-cW 124 28 0.1649 0.1290 0.5714 1.57e-04 5n1t-a1-m1-cM_5n1t-a1-m1-cW
6 5n1t-a1-m1-cM 124 28 0.1649 0.1290 0.5714 1.61e-04 5n1t-a1-m1-cM_5n1t-a1-m1-cW
7 5mab-a1-m1-cA 259 55 0.2062 0.0772 0.3636 0.34 5mab-a1-m1-cC_5mab-a1-m1-cA
8 5mab-a1-m1-cC 257 55 0.2062 0.0778 0.3636 0.37 5mab-a1-m1-cC_5mab-a1-m1-cA
9 4fer-a1-m1-cB 207 29 0.1134 0.0531 0.3793 2.5 4fer-a1-m1-cA_4fer-a1-m1-cB
10 4fer-a1-m1-cA 207 29 0.1134 0.0531 0.3793 2.5 4fer-a1-m1-cA_4fer-a1-m1-cB
11 3fdz-a1-m1-cB 228 53 0.1856 0.0789 0.3396 3.3 3fdz-a1-m1-cB_3fdz-a1-m1-cA
12 3fdz-a1-m1-cA 230 53 0.1856 0.0783 0.3396 3.4 3fdz-a1-m1-cB_3fdz-a1-m1-cA
13 8dkd-a1-m2-cA 393 41 0.1753 0.0433 0.4146 3.7 8dkd-a1-m1-cA_8dkd-a1-m2-cA
14 8dkd-a1-m1-cA 393 41 0.1753 0.0433 0.4146 3.7 8dkd-a1-m1-cA_8dkd-a1-m2-cA
15 5ah4-a2-m3-cA 380 41 0.1753 0.0447 0.4146 3.8 5ah4-a2-m1-cB_5ah4-a2-m3-cA
16 5ah4-a2-m1-cB 380 41 0.1753 0.0447 0.4146 3.8 5ah4-a2-m1-cB_5ah4-a2-m3-cA
17 6lx3-a1-m1-cB 206 48 0.1546 0.0728 0.3125 9.6 6lx3-a1-m1-cB_6lx3-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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