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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=38)
PENPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQYE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2yy0-a3-m3-cD 53 38 1.0000 0.7170 1.0000 2.97e-19 2yy0-a3-m2-cA_2yy0-a3-m3-cD, 2yy0-a3-m2-cD_2yy0-a3-m3-cD, 2yy0-a3-m3-cC_2yy0-a3-m3-cD
2 2yy0-a3-m2-cD 53 38 1.0000 0.7170 1.0000 2.97e-19 2yy0-a3-m2-cD_2yy0-a3-m3-cD
3 2yy0-a3-m3-cA 38 38 1.0000 1.0000 1.0000 7.41e-19 2yy0-a3-m3-cC_2yy0-a3-m3-cA
4 2yy0-a3-m2-cA 38 38 1.0000 1.0000 1.0000 7.41e-19 2yy0-a3-m2-cA_2yy0-a3-m3-cD
5 2yy0-a3-m3-cC 37 37 0.9737 1.0000 1.0000 8.54e-18 2yy0-a3-m3-cC_2yy0-a3-m3-cA, 2yy0-a3-m3-cC_2yy0-a3-m3-cD
6 2avw-a2-m1-cC 289 36 0.3158 0.0415 0.3333 3.2 2avw-a2-m1-cC_2avw-a2-m1-cD
7 2avw-a2-m1-cD 296 36 0.3158 0.0405 0.3333 3.6 2avw-a2-m1-cC_2avw-a2-m1-cD
8 6fue-a2-m1-cF 37 20 0.2632 0.2703 0.5000 4.1 6fue-a2-m1-cE_6fue-a2-m1-cF
9 5huz-a1-m1-cB 44 20 0.2895 0.2500 0.5500 5.4 5huz-a1-m1-cA_5huz-a1-m1-cB
10 5huz-a1-m1-cA 44 20 0.2895 0.2500 0.5500 5.4 5huz-a1-m1-cA_5huz-a1-m1-cB
11 4o7h-a1-m1-cA 222 24 0.2632 0.0450 0.4167 6.9 4o7h-a1-m1-cB_4o7h-a1-m1-cA
12 6fue-a2-m1-cE 36 18 0.2632 0.2778 0.5556 8.2 6fue-a2-m1-cE_6fue-a2-m1-cF
13 4o7h-a1-m1-cB 220 24 0.2632 0.0455 0.4167 8.3 4o7h-a1-m1-cB_4o7h-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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