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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
PEPLLREALGAALRSFRADKGVTLRELAEASRVSPGYLSELERGRKEVSSELLASVCHAL
GASVADVLIEAAGSMALQAAQEDLARVLEWSHP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3f51-a3-m1-cF 93 93 1.0000 1.0000 1.0000 2.10e-60 3f51-a3-m1-cD_3f51-a3-m1-cF
2 3f51-a3-m1-cD 93 92 0.9892 0.9892 1.0000 1.95e-59 3f51-a3-m1-cD_3f51-a3-m1-cF
3 5woq-a2-m1-cC 83 73 0.4624 0.5181 0.5890 7.44e-23 5woq-a2-m1-cC_5woq-a2-m1-cB
4 5woq-a2-m1-cB 85 73 0.4624 0.5059 0.5890 7.51e-23 5woq-a2-m1-cC_5woq-a2-m1-cB
5 6rmq-a2-m3-cB 121 73 0.3011 0.2314 0.3836 1.40e-08 6rmq-a2-m1-cB_6rmq-a2-m3-cB
6 6rmq-a2-m1-cB 121 73 0.3011 0.2314 0.3836 1.40e-08 6rmq-a2-m1-cB_6rmq-a2-m3-cB
7 6jq1-a1-m1-cA 129 56 0.2473 0.1783 0.4107 3.10e-07 6jq1-a1-m1-cA_6jq1-a1-m1-cB
8 6jq1-a1-m1-cB 130 56 0.2473 0.1769 0.4107 3.39e-07 6jq1-a1-m1-cA_6jq1-a1-m1-cB
9 2b5a-a2-m1-cD 76 56 0.2043 0.2500 0.3393 8.44e-06 2b5a-a2-m1-cC_2b5a-a2-m1-cD
10 2b5a-a2-m1-cC 76 56 0.2043 0.2500 0.3393 8.44e-06 2b5a-a2-m1-cC_2b5a-a2-m1-cD
11 1b0n-a6-m3-cA 103 63 0.2473 0.2233 0.3651 4.64e-05 1b0n-a6-m1-cA_1b0n-a6-m3-cA
12 1b0n-a6-m1-cA 103 63 0.2473 0.2233 0.3651 4.64e-05 1b0n-a6-m1-cA_1b0n-a6-m3-cA
13 1b0n-a5-m2-cA 103 63 0.2473 0.2233 0.3651 4.64e-05 1b0n-a5-m1-cA_1b0n-a5-m2-cA
14 1b0n-a5-m1-cA 103 63 0.2473 0.2233 0.3651 4.64e-05 1b0n-a5-m1-cA_1b0n-a5-m2-cA
15 3zkc-a1-m1-cB 63 61 0.2366 0.3492 0.3607 4.92e-05 3zkc-a1-m1-cA_3zkc-a1-m1-cB
16 3zkc-a1-m1-cA 61 61 0.2366 0.3607 0.3607 5.20e-05 3zkc-a1-m1-cA_3zkc-a1-m1-cB
17 3vk0-a2-m1-cB 87 65 0.2151 0.2299 0.3077 0.001 3vk0-a2-m1-cB_3vk0-a2-m1-cC
18 3vk0-a2-m1-cC 88 65 0.2151 0.2273 0.3077 0.001 3vk0-a2-m1-cB_3vk0-a2-m1-cC
19 6uzi-a2-m1-cC 470 47 0.1935 0.0383 0.3830 0.017 6uzi-a2-m1-cD_6uzi-a2-m1-cC
20 6uzi-a2-m1-cD 466 47 0.1935 0.0386 0.3830 0.018 6uzi-a2-m1-cD_6uzi-a2-m1-cC
21 2yqu-a1-m1-cB 455 37 0.1828 0.0374 0.4595 0.033 2yqu-a1-m1-cA_2yqu-a1-m1-cB
22 2yqu-a1-m1-cA 455 37 0.1828 0.0374 0.4595 0.033 2yqu-a1-m1-cA_2yqu-a1-m1-cB
23 3kxa-a2-m1-cC 128 61 0.2151 0.1562 0.3279 0.10 3kxa-a2-m1-cD_3kxa-a2-m1-cC
24 3kxa-a2-m1-cD 127 61 0.2151 0.1575 0.3279 0.11 3kxa-a2-m1-cD_3kxa-a2-m1-cC
25 1y7y-a1-m1-cA 69 41 0.1613 0.2174 0.3659 0.56 1y7y-a1-m1-cB_1y7y-a1-m1-cA
26 7p4a-a1-m2-cA 241 53 0.1720 0.0664 0.3019 0.65 7p4a-a1-m1-cB_7p4a-a1-m2-cA, 7p4a-a1-m2-cB_7p4a-a1-m2-cA
27 7p4a-a1-m1-cA 241 53 0.1720 0.0664 0.3019 0.65 7p4a-a1-m2-cB_7p4a-a1-m1-cA
28 1y7y-a1-m1-cB 66 41 0.1613 0.2273 0.3659 0.67 1y7y-a1-m1-cB_1y7y-a1-m1-cA
29 3mlf-a1-m1-cA 92 69 0.1720 0.1739 0.2319 1.4 3mlf-a1-m1-cB_3mlf-a1-m1-cA
30 1nt2-a2-m4-cB 236 53 0.2043 0.0805 0.3585 1.7 1nt2-a2-m3-cB_1nt2-a2-m4-cB
31 1nt2-a2-m3-cB 236 53 0.2043 0.0805 0.3585 1.7 1nt2-a2-m3-cB_1nt2-a2-m4-cB
32 6eei-a1-m1-cA 464 37 0.1613 0.0323 0.4054 1.9 6eei-a1-m1-cA_6eei-a1-m1-cB
33 6eei-a1-m1-cB 470 37 0.1613 0.0319 0.4054 2.0 6eei-a1-m1-cA_6eei-a1-m1-cB
34 6b9r-a2-m1-cB 442 60 0.2151 0.0452 0.3333 5.0 6b9r-a2-m1-cB_6b9r-a2-m1-cC
35 4mcx-a1-m1-cC 92 45 0.1505 0.1522 0.3111 5.2 4mcx-a1-m1-cC_4mcx-a1-m1-cA
36 6b9r-a2-m1-cC 446 60 0.2151 0.0448 0.3333 5.4 6b9r-a2-m1-cB_6b9r-a2-m1-cC
37 1v59-a1-m1-cB 478 36 0.1290 0.0251 0.3333 5.7 1v59-a1-m1-cA_1v59-a1-m1-cB
38 1v59-a1-m1-cA 478 36 0.1290 0.0251 0.3333 5.7 1v59-a1-m1-cA_1v59-a1-m1-cB
39 6aon-a1-m1-cB 473 36 0.1290 0.0254 0.3333 6.0 6aon-a1-m1-cA_6aon-a1-m1-cB
40 6aon-a1-m1-cA 473 36 0.1290 0.0254 0.3333 6.0 6aon-a1-m1-cA_6aon-a1-m1-cB
41 4mcx-a1-m1-cA 93 45 0.1505 0.1505 0.3111 6.1 4mcx-a1-m1-cC_4mcx-a1-m1-cA
42 7zpn-a1-m1-cB 128 24 0.1398 0.1016 0.5417 6.5 7zpn-a1-m1-cA_7zpn-a1-m1-cB
43 7zpn-a1-m1-cA 128 24 0.1398 0.1016 0.5417 6.5 7zpn-a1-m1-cA_7zpn-a1-m1-cB
44 2qf7-a1-m2-cA 1075 68 0.1935 0.0167 0.2647 8.4 2qf7-a1-m1-cA_2qf7-a1-m2-cA
45 2qf7-a1-m1-cA 1075 68 0.1935 0.0167 0.2647 8.4 2qf7-a1-m1-cA_2qf7-a1-m2-cA
46 1dxl-a2-m1-cD 467 36 0.1290 0.0257 0.3333 8.9 1dxl-a2-m1-cC_1dxl-a2-m1-cD
47 1dxl-a2-m1-cC 467 36 0.1290 0.0257 0.3333 8.9 1dxl-a2-m1-cC_1dxl-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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