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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
PFAQIYLIEGRTEEQKRAVIEKVTQAMMEAVGAPKENVRVWIHDVPKENWGIGGVSAKAL
GR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4faz-a1-m2-cC 62 62 1.0000 1.0000 1.0000 1.17e-40 4faz-a1-m1-cB_4faz-a1-m2-cC, 4faz-a1-m2-cB_4faz-a1-m2-cC
2 4faz-a1-m2-cB 62 62 1.0000 1.0000 1.0000 1.17e-40 4faz-a1-m2-cB_4faz-a1-m2-cC
3 4faz-a1-m1-cB 62 62 1.0000 1.0000 1.0000 1.17e-40 4faz-a1-m1-cB_4faz-a1-m2-cC
4 7xuy-a1-m6-cA 64 62 0.7581 0.7344 0.7581 1.87e-30 7xuy-a1-m3-cA_7xuy-a1-m6-cA, 7xuy-a1-m5-cA_7xuy-a1-m6-cA
5 7xuy-a1-m5-cA 64 62 0.7581 0.7344 0.7581 1.87e-30 7xuy-a1-m5-cA_7xuy-a1-m6-cA
6 7xuy-a1-m3-cA 64 62 0.7581 0.7344 0.7581 1.87e-30 7xuy-a1-m3-cA_7xuy-a1-m6-cA
7 1otf-a1-m1-cF 59 57 0.4839 0.5085 0.5263 5.64e-17 1otf-a1-m1-cC_1otf-a1-m1-cF
8 1otf-a1-m1-cE 59 57 0.4839 0.5085 0.5263 5.64e-17 1otf-a1-m1-cC_1otf-a1-m1-cE
9 1otf-a1-m1-cC 59 57 0.4839 0.5085 0.5263 5.64e-17 1otf-a1-m1-cC_1otf-a1-m1-cE, 1otf-a1-m1-cC_1otf-a1-m1-cF
10 6blm-a1-m1-cC 127 62 0.4516 0.2205 0.4516 3.77e-14 6blm-a1-m1-cA_6blm-a1-m1-cC, 6blm-a1-m1-cB_6blm-a1-m1-cC
11 6blm-a1-m1-cC 127 57 0.3226 0.1575 0.3509 1.49e-08 6blm-a1-m1-cA_6blm-a1-m1-cC, 6blm-a1-m1-cB_6blm-a1-m1-cC
12 6blm-a1-m1-cB 127 62 0.4516 0.2205 0.4516 3.77e-14 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cB_6blm-a1-m1-cC
13 6blm-a1-m1-cB 127 57 0.3226 0.1575 0.3509 1.49e-08 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cB_6blm-a1-m1-cC
14 6blm-a1-m1-cA 127 62 0.4516 0.2205 0.4516 3.77e-14 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cA_6blm-a1-m1-cC
15 6blm-a1-m1-cA 127 57 0.3226 0.1575 0.3509 1.49e-08 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cA_6blm-a1-m1-cC
16 6vvn-a1-m1-cC 123 56 0.4032 0.2033 0.4464 9.99e-14 6vvn-a1-m1-cA_6vvn-a1-m1-cC, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
17 6vvn-a1-m1-cC 123 54 0.3548 0.1789 0.4074 4.51e-12 6vvn-a1-m1-cA_6vvn-a1-m1-cC, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
18 6vvn-a1-m1-cB 123 56 0.4032 0.2033 0.4464 9.99e-14 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
19 6vvn-a1-m1-cB 123 54 0.3548 0.1789 0.4074 4.51e-12 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
20 6vvn-a1-m1-cA 123 56 0.4032 0.2033 0.4464 9.99e-14 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cA_6vvn-a1-m1-cC
21 6vvn-a1-m1-cA 123 54 0.3548 0.1789 0.4074 4.51e-12 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cA_6vvn-a1-m1-cC
22 5unq-a1-m1-cF 123 59 0.4677 0.2358 0.4915 2.02e-13 5unq-a1-m1-cA_5unq-a1-m1-cF
23 5unq-a1-m1-cF 123 50 0.2581 0.1301 0.3200 1.85e-07 5unq-a1-m1-cA_5unq-a1-m1-cF
24 5unq-a1-m1-cA 123 59 0.4677 0.2358 0.4915 2.02e-13 5unq-a1-m1-cA_5unq-a1-m1-cF
25 5unq-a1-m1-cA 123 50 0.2581 0.1301 0.3200 1.85e-07 5unq-a1-m1-cA_5unq-a1-m1-cF
26 2opa-a1-m3-cB 61 54 0.3548 0.3607 0.4074 1.03e-12 2opa-a1-m2-cB_2opa-a1-m3-cB, 2opa-a1-m3-cA_2opa-a1-m3-cB
27 2opa-a1-m3-cA 61 54 0.3548 0.3607 0.4074 1.03e-12 2opa-a1-m3-cA_2opa-a1-m3-cB
28 2opa-a1-m2-cB 61 54 0.3548 0.3607 0.4074 1.03e-12 2opa-a1-m2-cB_2opa-a1-m3-cB
29 6vvm-a1-m1-cC 123 54 0.3387 0.1707 0.3889 3.37e-12 6vvm-a1-m1-cA_6vvm-a1-m1-cC, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
30 6vvm-a1-m1-cC 123 62 0.3871 0.1951 0.3871 1.02e-10 6vvm-a1-m1-cA_6vvm-a1-m1-cC, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
31 6vvm-a1-m1-cB 123 54 0.3387 0.1707 0.3889 3.37e-12 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
32 6vvm-a1-m1-cB 123 62 0.3871 0.1951 0.3871 1.02e-10 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
33 6vvm-a1-m1-cA 123 54 0.3387 0.1707 0.3889 3.37e-12 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cA_6vvm-a1-m1-cC
34 6vvm-a1-m1-cA 123 62 0.3871 0.1951 0.3871 1.02e-10 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cA_6vvm-a1-m1-cC
35 7puo-a2-m1-cF 126 54 0.3387 0.1667 0.3889 1.28e-10 7puo-a2-m1-cF_7puo-a2-m1-cD, 7puo-a2-m1-cF_7puo-a2-m1-cE
36 7puo-a2-m1-cF 126 54 0.3548 0.1746 0.4074 2.96e-09 7puo-a2-m1-cF_7puo-a2-m1-cD, 7puo-a2-m1-cF_7puo-a2-m1-cE
37 7puo-a2-m1-cE 129 54 0.3387 0.1628 0.3889 1.34e-10 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cE
38 7puo-a2-m1-cE 129 54 0.3548 0.1705 0.4074 3.05e-09 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cE
39 7puo-a2-m1-cD 129 54 0.3387 0.1628 0.3889 1.34e-10 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cD
40 7puo-a2-m1-cD 129 54 0.3548 0.1705 0.4074 3.05e-09 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cD
41 6vvr-a1-m1-cC 123 62 0.4032 0.2033 0.4032 3.75e-09 6vvr-a1-m1-cB_6vvr-a1-m1-cC
42 6vvr-a1-m1-cC 123 54 0.1935 0.0976 0.2222 7.07e-04 6vvr-a1-m1-cB_6vvr-a1-m1-cC
43 6vvr-a1-m1-cB 123 62 0.4032 0.2033 0.4032 3.75e-09 6vvr-a1-m1-cB_6vvr-a1-m1-cC
44 6vvr-a1-m1-cB 123 54 0.1935 0.0976 0.2222 7.07e-04 6vvr-a1-m1-cB_6vvr-a1-m1-cC
45 3ry0-a1-m3-cA 65 56 0.3548 0.3385 0.3929 4.23e-09 3ry0-a1-m3-cB_3ry0-a1-m3-cA
46 3ry0-a1-m3-cB 63 56 0.3548 0.3492 0.3929 4.67e-09 3ry0-a1-m2-cB_3ry0-a1-m3-cB, 3ry0-a1-m3-cB_3ry0-a1-m3-cA
47 3ry0-a1-m2-cB 63 56 0.3548 0.3492 0.3929 4.67e-09 3ry0-a1-m2-cB_3ry0-a1-m3-cB
48 3abf-a1-m1-cE 61 52 0.3065 0.3115 0.3654 2.13e-08 3abf-a1-m1-cE_3abf-a1-m1-cC
49 3abf-a1-m1-cD 62 52 0.3065 0.3065 0.3654 2.35e-08 3abf-a1-m1-cD_3abf-a1-m1-cC
50 3abf-a1-m1-cC 63 52 0.3065 0.3016 0.3654 2.46e-08 3abf-a1-m1-cD_3abf-a1-m1-cC, 3abf-a1-m1-cE_3abf-a1-m1-cC
51 4fdx-a1-m3-cA 61 57 0.3065 0.3115 0.3333 9.64e-08 4fdx-a1-m3-cA_4fdx-a1-m3-cB
52 4fdx-a1-m3-cB 64 57 0.3065 0.2969 0.3333 1.04e-07 4fdx-a1-m2-cB_4fdx-a1-m3-cB, 4fdx-a1-m3-cA_4fdx-a1-m3-cB
53 4fdx-a1-m2-cB 64 57 0.3065 0.2969 0.3333 1.04e-07 4fdx-a1-m2-cB_4fdx-a1-m3-cB
54 2x4k-a1-m3-cB 62 55 0.2742 0.2742 0.3091 2.94e-07 2x4k-a1-m2-cB_2x4k-a1-m3-cB, 2x4k-a1-m3-cA_2x4k-a1-m3-cB
55 2x4k-a1-m3-cA 62 55 0.2742 0.2742 0.3091 2.94e-07 2x4k-a1-m3-cA_2x4k-a1-m3-cB
56 2x4k-a1-m2-cB 62 55 0.2742 0.2742 0.3091 2.94e-07 2x4k-a1-m2-cB_2x4k-a1-m3-cB
57 7m59-a1-m3-cB 64 46 0.3226 0.3125 0.4348 4.30e-07 7m59-a1-m2-cB_7m59-a1-m3-cB, 7m59-a1-m3-cA_7m59-a1-m3-cB
58 7m59-a1-m3-cA 64 46 0.3226 0.3125 0.4348 4.30e-07 7m59-a1-m3-cA_7m59-a1-m3-cB
59 7m59-a1-m2-cB 64 46 0.3226 0.3125 0.4348 4.30e-07 7m59-a1-m2-cB_7m59-a1-m3-cB
60 3m21-a1-m1-cC 63 63 0.3710 0.3651 0.3651 7.35e-07 3m21-a1-m1-cC_3m21-a1-m1-cD
61 3m21-a1-m1-cD 66 63 0.3710 0.3485 0.3651 8.65e-07 3m21-a1-m1-cC_3m21-a1-m1-cD
62 3m21-a1-m1-cB 66 63 0.3710 0.3485 0.3651 8.65e-07 3m21-a1-m1-cB_3m21-a1-m1-cF
63 3m21-a1-m1-cF 67 63 0.3710 0.3433 0.3651 9.03e-07 3m21-a1-m1-cB_3m21-a1-m1-cF
64 3mb2-a1-m1-cE 61 59 0.3226 0.3279 0.3390 1.39e-05 3mb2-a1-m1-cA_3mb2-a1-m1-cE
65 3mb2-a1-m1-cA 61 59 0.3226 0.3279 0.3390 1.39e-05 3mb2-a1-m1-cA_3mb2-a1-m1-cE
66 7yxv-a1-m3-cA 121 57 0.2581 0.1322 0.2807 1.52e-04 7yxv-a1-m2-cA_7yxv-a1-m3-cA
67 7yxv-a1-m2-cA 121 57 0.2581 0.1322 0.2807 1.52e-04 7yxv-a1-m2-cA_7yxv-a1-m3-cA
68 3m20-a1-m2-cC 58 40 0.2258 0.2414 0.3500 2.88e-04 3m20-a1-m1-cB_3m20-a1-m2-cC, 3m20-a1-m2-cB_3m20-a1-m2-cC
69 3m20-a1-m2-cB 58 40 0.2258 0.2414 0.3500 2.88e-04 3m20-a1-m2-cB_3m20-a1-m2-cC
70 3m20-a1-m1-cB 58 40 0.2258 0.2414 0.3500 2.88e-04 3m20-a1-m1-cB_3m20-a1-m2-cC
71 7m58-a1-m1-cC 143 40 0.2258 0.0979 0.3500 5.37e-04 7m58-a1-m1-cB_7m58-a1-m1-cC
72 7m58-a1-m1-cB 143 40 0.2258 0.0979 0.3500 5.37e-04 7m58-a1-m1-cB_7m58-a1-m1-cC
73 1s0y-a2-m1-cK 61 55 0.3226 0.3279 0.3636 6.07e-04 1s0y-a2-m1-cK_1s0y-a2-m1-cG
74 1s0y-a2-m1-cG 62 55 0.3226 0.3226 0.3636 6.47e-04 1s0y-a2-m1-cK_1s0y-a2-m1-cG
75 4lhp-a4-m1-cL 131 59 0.2903 0.1374 0.3051 0.023 4lhp-a4-m1-cJ_4lhp-a4-m1-cL
76 4lhp-a4-m1-cJ 131 59 0.2903 0.1374 0.3051 0.023 4lhp-a4-m1-cJ_4lhp-a4-m1-cL
77 7tvk-a2-m1-cF 118 52 0.2097 0.1102 0.2500 0.024 7tvk-a2-m1-cD_7tvk-a2-m1-cF
78 7tvk-a2-m1-cD 118 52 0.2097 0.1102 0.2500 0.024 7tvk-a2-m1-cD_7tvk-a2-m1-cF
79 4u5p-a1-m1-cC 141 63 0.2903 0.1277 0.2857 0.029 4u5p-a1-m1-cB_4u5p-a1-m1-cC
80 4u5p-a1-m1-cB 141 63 0.2903 0.1277 0.2857 0.029 4u5p-a1-m1-cB_4u5p-a1-m1-cC
81 2aal-a2-m1-cE 129 37 0.1774 0.0853 0.2973 0.079 2aal-a2-m1-cD_2aal-a2-m1-cE
82 2aal-a2-m1-cE 129 43 0.1935 0.0930 0.2791 5.0 2aal-a2-m1-cD_2aal-a2-m1-cE
83 2aal-a2-m1-cD 129 37 0.1774 0.0853 0.2973 0.079 2aal-a2-m1-cD_2aal-a2-m1-cE
84 2aal-a2-m1-cD 129 43 0.1935 0.0930 0.2791 5.0 2aal-a2-m1-cD_2aal-a2-m1-cE
85 3gvy-a1-m8-cC 158 41 0.1935 0.0759 0.2927 1.5 3gvy-a1-m5-cB_3gvy-a1-m8-cC, 3gvy-a1-m8-cA_3gvy-a1-m8-cC
86 3gvy-a1-m5-cB 158 41 0.1935 0.0759 0.2927 1.5 3gvy-a1-m5-cB_3gvy-a1-m8-cC
87 3gvy-a1-m8-cA 157 41 0.1935 0.0764 0.2927 1.5 3gvy-a1-m6-cA_3gvy-a1-m8-cA, 3gvy-a1-m8-cA_3gvy-a1-m8-cC
88 3gvy-a1-m6-cA 157 41 0.1935 0.0764 0.2927 1.5 3gvy-a1-m6-cA_3gvy-a1-m8-cA
89 2xcz-a1-m3-cA 114 44 0.2097 0.1140 0.2955 5.3 2xcz-a1-m2-cA_2xcz-a1-m3-cA
90 2xcz-a1-m2-cA 114 44 0.2097 0.1140 0.2955 5.3 2xcz-a1-m2-cA_2xcz-a1-m3-cA
91 3i44-a1-m2-cA 476 49 0.2097 0.0273 0.2653 5.7 3i44-a1-m1-cA_3i44-a1-m2-cA
92 3i44-a1-m1-cA 476 49 0.2097 0.0273 0.2653 5.7 3i44-a1-m1-cA_3i44-a1-m2-cA
93 4neg-a1-m1-cB 304 67 0.2903 0.0592 0.2687 7.5 4neg-a1-m1-cB_4neg-a1-m1-cA
94 3a9z-a1-m1-cB 399 34 0.1935 0.0301 0.3529 8.8 3a9z-a1-m1-cB_3a9z-a1-m1-cA
95 3a9z-a1-m1-cA 403 34 0.1935 0.0298 0.3529 8.8 3a9z-a1-m1-cB_3a9z-a1-m1-cA
96 5thh-a1-m2-cA 329 26 0.1452 0.0274 0.3462 9.5 5thh-a1-m1-cA_5thh-a1-m2-cA
97 5thh-a1-m1-cA 329 26 0.1452 0.0274 0.3462 9.5 5thh-a1-m1-cA_5thh-a1-m2-cA
98 5gg4-a2-m1-cD 228 26 0.0968 0.0263 0.2308 9.8 5gg4-a2-m1-cD_5gg4-a2-m1-cC
99 5gg4-a2-m1-cC 231 26 0.0968 0.0260 0.2308 9.8 5gg4-a2-m1-cD_5gg4-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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