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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=56)
PFIECHIATGLSVARKQQLIRDVIDVTNKSIGSDPKIINVLLVEHAEANMSISGRI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1s0y-a1-m1-cD 56 56 1.0000 1.0000 1.0000 7.76e-36 1s0y-a1-m1-cB_1s0y-a1-m1-cD
2 1s0y-a1-m1-cB 55 55 0.9821 1.0000 1.0000 2.45e-35 1s0y-a1-m1-cB_1s0y-a1-m1-cD
3 6vvn-a1-m1-cC 123 56 0.2857 0.1301 0.2857 0.002 6vvn-a1-m1-cA_6vvn-a1-m1-cC, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
4 6vvn-a1-m1-cB 123 56 0.2857 0.1301 0.2857 0.002 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
5 6vvn-a1-m1-cA 123 56 0.2857 0.1301 0.2857 0.002 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cA_6vvn-a1-m1-cC
6 6vvr-a1-m1-cC 123 56 0.2857 0.1301 0.2857 0.004 6vvr-a1-m1-cB_6vvr-a1-m1-cC
7 6vvr-a1-m1-cB 123 56 0.2857 0.1301 0.2857 0.004 6vvr-a1-m1-cB_6vvr-a1-m1-cC
8 7puo-a2-m1-cE 129 56 0.3036 0.1318 0.3036 0.010 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cE
9 7puo-a2-m1-cE 129 56 0.2500 0.1085 0.2500 0.019 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cE
10 7puo-a2-m1-cD 129 56 0.3036 0.1318 0.3036 0.010 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cD
11 7puo-a2-m1-cD 129 56 0.2500 0.1085 0.2500 0.019 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cD
12 7puo-a2-m1-cF 126 56 0.3036 0.1349 0.3036 0.010 7puo-a2-m1-cF_7puo-a2-m1-cD, 7puo-a2-m1-cF_7puo-a2-m1-cE
13 7puo-a2-m1-cF 126 56 0.2500 0.1111 0.2500 0.020 7puo-a2-m1-cF_7puo-a2-m1-cD, 7puo-a2-m1-cF_7puo-a2-m1-cE
14 6blm-a1-m1-cC 127 55 0.3214 0.1417 0.3273 0.011 6blm-a1-m1-cA_6blm-a1-m1-cC, 6blm-a1-m1-cB_6blm-a1-m1-cC
15 6blm-a1-m1-cB 127 55 0.3214 0.1417 0.3273 0.011 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cB_6blm-a1-m1-cC
16 6blm-a1-m1-cA 127 55 0.3214 0.1417 0.3273 0.011 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cA_6blm-a1-m1-cC
17 7m59-a1-m3-cB 64 55 0.2857 0.2500 0.2909 0.011 7m59-a1-m2-cB_7m59-a1-m3-cB, 7m59-a1-m3-cA_7m59-a1-m3-cB
18 7m59-a1-m3-cA 64 55 0.2857 0.2500 0.2909 0.011 7m59-a1-m3-cA_7m59-a1-m3-cB
19 7m59-a1-m2-cB 64 55 0.2857 0.2500 0.2909 0.011 7m59-a1-m2-cB_7m59-a1-m3-cB
20 6vvm-a1-m1-cC 123 55 0.2857 0.1301 0.2909 0.017 6vvm-a1-m1-cA_6vvm-a1-m1-cC, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
21 6vvm-a1-m1-cB 123 55 0.2857 0.1301 0.2909 0.017 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
22 6vvm-a1-m1-cA 123 55 0.2857 0.1301 0.2909 0.017 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cA_6vvm-a1-m1-cC
23 5unq-a1-m1-cF 123 44 0.2500 0.1138 0.3182 0.16 5unq-a1-m1-cA_5unq-a1-m1-cF
24 5unq-a1-m1-cA 123 44 0.2500 0.1138 0.3182 0.16 5unq-a1-m1-cA_5unq-a1-m1-cF
25 8glv-a1-m1-cFa 4484 33 0.2321 0.0029 0.3939 2.4 8glv-a1-m1-cAX_8glv-a1-m1-cFa
26 8glv-a1-m1-cAX 4484 33 0.2321 0.0029 0.3939 2.4 8glv-a1-m1-cAX_8glv-a1-m1-cFa
27 7tvk-a2-m1-cF 118 52 0.2679 0.1271 0.2885 3.0 7tvk-a2-m1-cD_7tvk-a2-m1-cF
28 7tvk-a2-m1-cD 118 52 0.2679 0.1271 0.2885 3.0 7tvk-a2-m1-cD_7tvk-a2-m1-cF
29 3a7g-a3-m1-cA 289 33 0.2321 0.0450 0.3939 4.1 3a7g-a3-m1-cA_3a7g-a3-m2-cB
30 3a7g-a3-m2-cB 290 33 0.2321 0.0448 0.3939 4.1 3a7g-a3-m1-cA_3a7g-a3-m2-cB
31 1ev0-a1-m1-cB 58 35 0.2143 0.2069 0.3429 4.7 1ev0-a1-m1-cA_1ev0-a1-m1-cB
32 1ev0-a1-m1-cA 58 35 0.2143 0.2069 0.3429 4.7 1ev0-a1-m1-cA_1ev0-a1-m1-cB
33 3r9j-a4-m1-cD 70 35 0.2143 0.1714 0.3429 7.0 3r9j-a4-m1-cC_3r9j-a4-m1-cD
34 3r9j-a4-m1-cC 70 35 0.2143 0.1714 0.3429 7.0 3r9j-a4-m1-cC_3r9j-a4-m1-cD
35 3zif-a1-m9-cM 450 34 0.2143 0.0267 0.3529 7.9 3zif-a1-m8-cM_3zif-a1-m9-cM
36 3zif-a1-m8-cM 450 34 0.2143 0.0267 0.3529 7.9 3zif-a1-m8-cM_3zif-a1-m9-cM

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Reference:
Jacob Schwartz et al.

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