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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
PFINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGESV
HHLRQK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3m21-a1-m1-cD 66 66 1.0000 1.0000 1.0000 1.28e-42 3m21-a1-m1-cC_3m21-a1-m1-cD
2 3m21-a1-m1-cB 66 66 1.0000 1.0000 1.0000 1.28e-42 3m21-a1-m1-cB_3m21-a1-m1-cF
3 3m21-a1-m1-cF 67 66 1.0000 0.9851 1.0000 1.44e-42 3m21-a1-m1-cB_3m21-a1-m1-cF
4 3m21-a1-m1-cC 63 63 0.9545 1.0000 1.0000 4.36e-40 3m21-a1-m1-cC_3m21-a1-m1-cD
5 4faz-a1-m2-cC 62 63 0.3485 0.3710 0.3651 9.21e-07 4faz-a1-m1-cB_4faz-a1-m2-cC, 4faz-a1-m2-cB_4faz-a1-m2-cC
6 4faz-a1-m2-cB 62 63 0.3485 0.3710 0.3651 9.21e-07 4faz-a1-m2-cB_4faz-a1-m2-cC
7 4faz-a1-m1-cB 62 63 0.3485 0.3710 0.3651 9.21e-07 4faz-a1-m1-cB_4faz-a1-m2-cC
8 2x4k-a1-m3-cB 62 57 0.3030 0.3226 0.3509 1.93e-06 2x4k-a1-m2-cB_2x4k-a1-m3-cB, 2x4k-a1-m3-cA_2x4k-a1-m3-cB
9 2x4k-a1-m3-cA 62 57 0.3030 0.3226 0.3509 1.93e-06 2x4k-a1-m3-cA_2x4k-a1-m3-cB
10 2x4k-a1-m2-cB 62 57 0.3030 0.3226 0.3509 1.93e-06 2x4k-a1-m2-cB_2x4k-a1-m3-cB
11 2opa-a1-m3-cB 61 63 0.2576 0.2787 0.2698 2.60e-06 2opa-a1-m2-cB_2opa-a1-m3-cB, 2opa-a1-m3-cA_2opa-a1-m3-cB
12 2opa-a1-m3-cA 61 63 0.2576 0.2787 0.2698 2.60e-06 2opa-a1-m3-cA_2opa-a1-m3-cB
13 2opa-a1-m2-cB 61 63 0.2576 0.2787 0.2698 2.60e-06 2opa-a1-m2-cB_2opa-a1-m3-cB
14 1otf-a1-m1-cF 59 46 0.2879 0.3220 0.4130 6.02e-06 1otf-a1-m1-cC_1otf-a1-m1-cF
15 1otf-a1-m1-cE 59 46 0.2879 0.3220 0.4130 6.02e-06 1otf-a1-m1-cC_1otf-a1-m1-cE
16 1otf-a1-m1-cC 59 46 0.2879 0.3220 0.4130 6.02e-06 1otf-a1-m1-cC_1otf-a1-m1-cE, 1otf-a1-m1-cC_1otf-a1-m1-cF
17 7xuy-a1-m6-cA 64 63 0.3182 0.3281 0.3333 1.05e-04 7xuy-a1-m3-cA_7xuy-a1-m6-cA, 7xuy-a1-m5-cA_7xuy-a1-m6-cA
18 7xuy-a1-m5-cA 64 63 0.3182 0.3281 0.3333 1.05e-04 7xuy-a1-m5-cA_7xuy-a1-m6-cA
19 7xuy-a1-m3-cA 64 63 0.3182 0.3281 0.3333 1.05e-04 7xuy-a1-m3-cA_7xuy-a1-m6-cA
20 6blm-a1-m1-cC 127 52 0.2424 0.1260 0.3077 1.29e-04 6blm-a1-m1-cA_6blm-a1-m1-cC, 6blm-a1-m1-cB_6blm-a1-m1-cC
21 6blm-a1-m1-cB 127 52 0.2424 0.1260 0.3077 1.29e-04 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cB_6blm-a1-m1-cC
22 6blm-a1-m1-cA 127 52 0.2424 0.1260 0.3077 1.29e-04 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cA_6blm-a1-m1-cC
23 7puo-a2-m1-cF 126 46 0.2576 0.1349 0.3696 3.32e-04 7puo-a2-m1-cF_7puo-a2-m1-cD, 7puo-a2-m1-cF_7puo-a2-m1-cE
24 7puo-a2-m1-cF 126 46 0.2273 0.1190 0.3261 0.016 7puo-a2-m1-cF_7puo-a2-m1-cD, 7puo-a2-m1-cF_7puo-a2-m1-cE
25 7puo-a2-m1-cE 129 46 0.2576 0.1318 0.3696 3.47e-04 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cE
26 7puo-a2-m1-cE 129 46 0.2273 0.1163 0.3261 0.017 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cE
27 7puo-a2-m1-cD 129 46 0.2576 0.1318 0.3696 3.47e-04 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cD
28 7puo-a2-m1-cD 129 46 0.2273 0.1163 0.3261 0.017 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cD
29 6vvn-a1-m1-cC 123 52 0.2424 0.1301 0.3077 5.10e-04 6vvn-a1-m1-cA_6vvn-a1-m1-cC, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
30 6vvn-a1-m1-cC 123 41 0.1970 0.1057 0.3171 0.012 6vvn-a1-m1-cA_6vvn-a1-m1-cC, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
31 6vvn-a1-m1-cB 123 52 0.2424 0.1301 0.3077 5.10e-04 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
32 6vvn-a1-m1-cB 123 41 0.1970 0.1057 0.3171 0.012 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
33 6vvn-a1-m1-cA 123 52 0.2424 0.1301 0.3077 5.10e-04 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cA_6vvn-a1-m1-cC
34 6vvn-a1-m1-cA 123 41 0.1970 0.1057 0.3171 0.012 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cA_6vvn-a1-m1-cC
35 6vvm-a1-m1-cC 123 52 0.2576 0.1382 0.3269 0.001 6vvm-a1-m1-cA_6vvm-a1-m1-cC, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
36 6vvm-a1-m1-cC 123 46 0.2121 0.1138 0.3043 0.012 6vvm-a1-m1-cA_6vvm-a1-m1-cC, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
37 6vvm-a1-m1-cB 123 52 0.2576 0.1382 0.3269 0.001 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
38 6vvm-a1-m1-cB 123 46 0.2121 0.1138 0.3043 0.012 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
39 6vvm-a1-m1-cA 123 52 0.2576 0.1382 0.3269 0.001 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cA_6vvm-a1-m1-cC
40 6vvm-a1-m1-cA 123 46 0.2121 0.1138 0.3043 0.012 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cA_6vvm-a1-m1-cC
41 4u5p-a1-m1-cC 141 59 0.2424 0.1135 0.2712 0.044 4u5p-a1-m1-cB_4u5p-a1-m1-cC
42 4u5p-a1-m1-cB 141 59 0.2424 0.1135 0.2712 0.044 4u5p-a1-m1-cB_4u5p-a1-m1-cC
43 5unq-a1-m1-cF 123 53 0.2424 0.1301 0.3019 0.057 5unq-a1-m1-cA_5unq-a1-m1-cF
44 5unq-a1-m1-cA 123 53 0.2424 0.1301 0.3019 0.057 5unq-a1-m1-cA_5unq-a1-m1-cF
45 3m20-a1-m2-cC 58 43 0.1364 0.1552 0.2093 0.15 3m20-a1-m1-cB_3m20-a1-m2-cC, 3m20-a1-m2-cB_3m20-a1-m2-cC
46 3m20-a1-m2-cB 58 43 0.1364 0.1552 0.2093 0.15 3m20-a1-m2-cB_3m20-a1-m2-cC
47 3m20-a1-m1-cB 58 43 0.1364 0.1552 0.2093 0.15 3m20-a1-m1-cB_3m20-a1-m2-cC
48 3abf-a1-m1-cD 62 45 0.1667 0.1774 0.2444 0.30 3abf-a1-m1-cD_3abf-a1-m1-cC
49 3abf-a1-m1-cE 61 45 0.1667 0.1803 0.2444 0.31 3abf-a1-m1-cE_3abf-a1-m1-cC
50 3abf-a1-m1-cC 63 45 0.1667 0.1746 0.2444 0.33 3abf-a1-m1-cD_3abf-a1-m1-cC, 3abf-a1-m1-cE_3abf-a1-m1-cC
51 4kc0-a1-m1-cB 178 32 0.1364 0.0506 0.2812 1.6 4kc0-a1-m1-cB_4kc0-a1-m1-cA
52 4kc0-a1-m1-cA 182 32 0.1364 0.0495 0.2812 1.6 4kc0-a1-m1-cB_4kc0-a1-m1-cA
53 4lok-a1-m1-cB 180 31 0.1364 0.0500 0.2903 2.1 4lok-a1-m1-cB_4lok-a1-m1-cA
54 4lok-a1-m1-cA 181 31 0.1364 0.0497 0.2903 2.1 4lok-a1-m1-cB_4lok-a1-m1-cA
55 5gu6-a2-m2-cA 377 38 0.1818 0.0318 0.3158 3.2 5gu6-a2-m1-cA_5gu6-a2-m2-cA
56 5gu6-a2-m1-cA 377 38 0.1818 0.0318 0.3158 3.2 5gu6-a2-m1-cA_5gu6-a2-m2-cA
57 6vvr-a1-m1-cC 123 58 0.2273 0.1220 0.2586 3.2 6vvr-a1-m1-cB_6vvr-a1-m1-cC
58 6vvr-a1-m1-cB 123 58 0.2273 0.1220 0.2586 3.2 6vvr-a1-m1-cB_6vvr-a1-m1-cC
59 5xwm-a2-m1-cD 368 38 0.1818 0.0326 0.3158 3.2 5xwm-a2-m1-cB_5xwm-a2-m1-cD
60 6gyz-a1-m1-cA 447 29 0.1667 0.0246 0.3793 3.5 6gyz-a1-m1-cB_6gyz-a1-m1-cA
61 5xwm-a2-m1-cB 354 38 0.1818 0.0339 0.3158 3.5 5xwm-a2-m1-cB_5xwm-a2-m1-cD
62 6gyz-a1-m1-cB 446 29 0.1667 0.0247 0.3793 3.6 6gyz-a1-m1-cB_6gyz-a1-m1-cA
63 3niq-a1-m3-cB 313 21 0.1667 0.0351 0.5238 3.8 3niq-a1-m2-cB_3niq-a1-m3-cB, 3niq-a1-m3-cB_3niq-a1-m2-cA, 3niq-a1-m3-cB_3niq-a1-m3-cA
64 3niq-a1-m2-cB 313 21 0.1667 0.0351 0.5238 3.8 3niq-a1-m2-cB_3niq-a1-m3-cB
65 3niq-a1-m3-cA 315 21 0.1667 0.0349 0.5238 3.8 3niq-a1-m3-cB_3niq-a1-m3-cA
66 3niq-a1-m2-cA 315 21 0.1667 0.0349 0.5238 3.8 3niq-a1-m3-cB_3niq-a1-m2-cA
67 2p7n-a1-m2-cA 327 26 0.1667 0.0336 0.4231 7.7 2p7n-a1-m1-cA_2p7n-a1-m2-cA
68 2p7n-a1-m1-cA 327 26 0.1667 0.0336 0.4231 7.7 2p7n-a1-m1-cA_2p7n-a1-m2-cA
69 7k5k-a1-m1-cF 545 36 0.1970 0.0239 0.3611 9.7 7k5k-a1-m1-cB_7k5k-a1-m1-cF, 7k5k-a1-m1-cE_7k5k-a1-m1-cF
70 7k5k-a1-m1-cE 545 36 0.1970 0.0239 0.3611 9.7 7k5k-a1-m1-cE_7k5k-a1-m1-cF
71 7k5k-a1-m1-cB 545 36 0.1970 0.0239 0.3611 9.7 7k5k-a1-m1-cB_7k5k-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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