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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
PGEASMLRDKINFLNIEREKEKNIQAVKVNELQVKHLQELAKLKQELQKLEDEKKFLQME
A

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5omd-a1-m2-cA 61 61 1.0000 1.0000 1.0000 1.05e-36 5omd-a1-m1-cA_5omd-a1-m2-cA
2 5omd-a1-m1-cA 61 61 1.0000 1.0000 1.0000 1.05e-36 5omd-a1-m1-cA_5omd-a1-m2-cA
3 5omb-a1-m1-cD 98 60 0.3934 0.2449 0.4000 1.40e-04 5omb-a1-m1-cC_5omb-a1-m1-cD
4 5omb-a1-m1-cC 98 60 0.3934 0.2449 0.4000 1.40e-04 5omb-a1-m1-cC_5omb-a1-m1-cD
5 3d3f-a1-m1-cB 275 44 0.2459 0.0545 0.3409 3.2 3d3f-a1-m1-cA_3d3f-a1-m1-cB
6 3d3f-a1-m1-cA 275 44 0.2459 0.0545 0.3409 3.2 3d3f-a1-m1-cA_3d3f-a1-m1-cB
7 3nwz-a2-m1-cC 145 48 0.2295 0.0966 0.2917 4.1 3nwz-a2-m1-cC_3nwz-a2-m1-cA
8 3nwz-a1-m1-cC 145 48 0.2295 0.0966 0.2917 4.1 3nwz-a1-m1-cD_3nwz-a1-m1-cC
9 4xia-a1-m2-cB 393 36 0.1639 0.0254 0.2778 4.4 4xia-a1-m1-cA_4xia-a1-m2-cB, 4xia-a1-m1-cB_4xia-a1-m2-cB, 4xia-a1-m2-cA_4xia-a1-m2-cB
10 4xia-a1-m2-cA 393 36 0.1639 0.0254 0.2778 4.4 4xia-a1-m2-cA_4xia-a1-m2-cB
11 4xia-a1-m1-cB 393 36 0.1639 0.0254 0.2778 4.4 4xia-a1-m1-cB_4xia-a1-m2-cB
12 4xia-a1-m1-cA 393 36 0.1639 0.0254 0.2778 4.4 4xia-a1-m1-cA_4xia-a1-m2-cB
13 7d3y-a1-m1-cB 337 50 0.2295 0.0415 0.2800 5.3 7d3y-a1-m1-cB_7d3y-a1-m1-cA
14 7d3y-a1-m1-cA 341 50 0.2295 0.0411 0.2800 5.6 7d3y-a1-m1-cB_7d3y-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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