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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=24)
PGPGPGFPGMKGHRGFDGPGPGPG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8hhi-a1-m1-cC 24 24 1.0000 1.0000 1.0000 1.31e-08 8hhi-a1-m1-cA_8hhi-a1-m1-cC, 8hhi-a1-m1-cB_8hhi-a1-m1-cC
2 8hhi-a1-m1-cB 24 24 1.0000 1.0000 1.0000 1.31e-08 8hhi-a1-m1-cA_8hhi-a1-m1-cB, 8hhi-a1-m1-cB_8hhi-a1-m1-cC
3 8hhi-a1-m1-cA 24 24 1.0000 1.0000 1.0000 1.31e-08 8hhi-a1-m1-cA_8hhi-a1-m1-cB, 8hhi-a1-m1-cA_8hhi-a1-m1-cC
4 6los-a1-m2-cG 21 17 0.5833 0.6667 0.8235 0.24 6los-a1-m2-cH_6los-a1-m2-cG
5 8hhk-a2-m1-cI 20 20 0.5417 0.6500 0.6500 0.55 8hhk-a2-m1-cG_8hhk-a2-m1-cI, 8hhk-a2-m1-cH_8hhk-a2-m1-cI
6 6los-a1-m2-cH 19 16 0.5417 0.6842 0.8125 0.57 6los-a1-m2-cH_6los-a1-m2-cG
7 8hhk-a2-m1-cH 19 19 0.5000 0.6316 0.6316 1.6 8hhk-a2-m1-cG_8hhk-a2-m1-cH, 8hhk-a2-m1-cH_8hhk-a2-m1-cI
8 8hhk-a2-m1-cG 19 19 0.5000 0.6316 0.6316 1.6 8hhk-a2-m1-cG_8hhk-a2-m1-cH, 8hhk-a2-m1-cG_8hhk-a2-m1-cI

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Reference:
Jacob Schwartz et al.

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